PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc010213.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 254aa MW: 28221.8 Da PI: 6.7321 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.9 | 5.6e-14 | 20 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT eE++++++a +++ + Wk+I +g +t q++s+ qky Cse_sc010213.1_g020.1 20 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 64 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGDSSSGKKV RKPYTITKSR ESWTDEEHDK FLEALQLFDR DWKKIEDFVG SKTVIQIRSH 60 AQKYFLKVQK NGSIAHVPPP RPKRKATHPY PQKAPKNVLL PLQASMGYPS SLSGLAPGYS 120 PWDDTSLFIS QSGEIMPSQD EYELHGFEGM HASDTGSKGA GKISNISSSG IGSSSREMPT 180 SEVSNPGEQA SIPHGIPDFS EVYSFIGSVF DPESKGHVQK LKEMDPINFE TVLLLMRNLT 240 VNLSNPEFEP MDYK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09600.1 | 1e-111 | MYB_related family protein |