PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc010194.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 181aa MW: 20625.9 Da PI: 9.5331 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.5 | 1.2e-32 | 103 | 161 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fpr+YYrCt++gC+vkk+v+r ++d vv++tYeg+H+h+ Cse_sc010194.1_g010.1 103 LDDGYRWRKYGQKAVKNNKFPRNYYRCTYQGCNVKKQVQRLSNDDGVVVTTYEGTHTHP 161 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 181 aa Download sequence |
MNDNIGAIFS YPSSSSYLSL NMANTNHAND YEQTGVTEKD HGKYESFDGV MADDHVSKAR 60 NGLAQGDGKE LNVSSGKINI RKGEKKIKKP KHAFQTRSQV DILDDGYRWR KYGQKAVKNN 120 KFPRNYYRCT YQGCNVKKQV QRLSNDDGVV VTTYEGTHTH PIEKSTDNFE NILTQMQIYS 180 R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13080.1 | 2e-56 | WRKY family protein |