PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009864.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 331aa MW: 37912.6 Da PI: 7.9248

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009864.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	71.1	1.6e-22	132	192	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqK++ +s++ r+YYrCt++ gC+++k+v++ ++p ++tY g+H+++ Cse_sc009864.1_g010.1 132 DDGHAWRKYGQKQILNSKHQRNYYRCTYKfdqGCRATKHVQQIMDNPPKYKTTYIGQHTCN 192 8*************************9999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
METPTWPESL PSNRIQAIQE LIQGQELVSK LYEMLWRPKY ESDPILEDGV VVQIQGMFEN 60 TLSVMRSCSS IDPQRHLPKD FHSLSGSDGT ISKDSDRRQS TLKPAKIRRG CDNRRRKISR 120 TSREEVTSVL IDDGHAWRKY GQKQILNSKH QRNYYRCTYK FDQGCRATKH VQQIMDNPPK 180 YKTTYIGQHT CNNLQRTPPI ILDSSDPSDT SILLCFETKE FVKSEPVSLM EKKQIDPSQC 240 SLKHNSYRSS NNHLSRNPNT QVPFVKSEPV SLTSSGLNHG HQTPLAVYLG CDNGDVKSSE 300 AYSSMTSAYA CEMDHMFGMN DVNDYTYEFC Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	2e-36	WRKY family protein