PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009622.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 277aa    MW: 30733.2 Da    PI: 6.9401
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009622.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.26.6e-21123173255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAaka+++a+ kl+g
  Cse_sc009622.1_g050.1 123 HYRGVRQRP-WGKFAAEIRDP---NkKGTRVWLGTFDTAIEAAKAYDHAAFKLRG 173
                            8********.**********9...4345*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MSFTNESSTL DLIRQHLLID DQSFLQTYSL SFENNSIKTE FANNSCFGHN LETNNSTSKS  60
NSNNTFSNES ESVVSNCTST TSSNNSFKER KRSLNISNIS IPFSPPKVVK ETVKQEEFEE  120
RKHYRGVRQR PWGKFAAEIR DPNKKGTRVW LGTFDTAIEA AKAYDHAAFK LRGSKAILNF  180
PLEIGYSVAP PPGVTITSRK RAAEEIEVES VRKEPKVEPV TAEFDGVKSD NGVVPLTPSS  240
WTAVWDFGDG NGKGIFEVPP LSPYPNMNFS SGCIVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-51ERF family protein