PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009577.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 347aa MW: 39118.1 Da PI: 6.8445

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009577.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.9	4.3e-14	136	187	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ Cse_sc009577.1_g040.1 136 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 187 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MALETLSSNE LLNFIIYDTI SATPFTFNDS SSQNTNNSNT FFYNLHNHNP NPNPNLLSQE 60 LEGADMEIMS SNSSLTTTTE KMSMAVQAYC GGKNPEKNYC DNNNKNKSIH NNLGVQKKKR 120 RRRPRVCKNK EEAESQRMTH IAVERNRRKQ MNEHLAVLRS LMPESYVQRG DQASIVGGAI 180 EFVKELEHLL QSLEAKKFVM TQQPQEDDDN GGHDSNFTNL SSAAPPFSQF FSYPQYTCSQ 240 IPNKYTSKSK AAIADIEVTL IETHANLRIL SQKRLAQLSK MVACFQTLYL TVLHLNVTTL 300 DPLVLYSISV KVEEGCRLNS ADEIAGAVHQ MLRIIEEEAT LCVVDSR

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MALETLSSNE LLNFIIYDTI SATPFTFNDS SSQNTNNSNT FFYNLHNHNP NPNPNLLSQE  60
LEGADMEIMS SNSSLTTTTE KMSMAVQAYC GGKNPEKNYC DNNNKNKSIH NNLGVQKKKR  120
RRRPRVCKNK EEAESQRMTH IAVERNRRKQ MNEHLAVLRS LMPESYVQRG DQASIVGGAI  180
EFVKELEHLL QSLEAKKFVM TQQPQEDDDN GGHDSNFTNL SSAAPPFSQF FSYPQYTCSQ  240
IPNKYTSKSK AAIADIEVTL IETHANLRIL SQKRLAQLSK MVACFQTLYL TVLHLNVTTL  300
DPLVLYSISV KVEEGCRLNS ADEIAGAVHQ MLRIIEEEAT LCVVDSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	122	QKKKRRR
2	117	122	KKKRRR
3	117	123	KKKRRRR
4	118	123	KKKRRR
5	137	148	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-69	bHLH family protein