PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009507.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 248aa MW: 28260.9 Da PI: 4.9504 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.1 | 1.5e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed ll ++++++G g W++I+ + g+ R++k+c++rw++yl Cse_sc009507.1_g020.1 13 KGAWTPQEDMLLRNCIQEYGEGKWHLIPLKAGLSRCRKSCRLRWLNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.6 | 7.6e-15 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++ Cse_sc009507.1_g020.1 66 KGDFEEDEIDLILRLHKLLGNR-WSLIAGRIP-GRTANDVKNYWNTH 110 67899*****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MRPSSSTGLR LRKGAWTPQE DMLLRNCIQE YGEGKWHLIP LKAGLSRCRK SCRLRWLNYL 60 RPNIKKGDFE EDEIDLILRL HKLLGNRWSL IAGRIPGRTA NDVKNYWNTH IRPRSNKQNN 120 EPKDITTAVT VIKPQPRILS KTVNSNPPMA APQDYNLVKS THDAVETAFD ISSGLVSSPI 180 VSDAKINEYM VELFDNEEKE FDGEIGWSLD GTPFEGEALD AEQEDGESSV FDLPIDEFMW 240 ECLNSDNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 6e-61 | MYB family protein |