PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009314.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 658aa    MW: 72231.5 Da    PI: 5.7916
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009314.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS420.61.3e-1282986572374
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                             +lLl+cAeavs++++e+a+++L ++sel++p+g++ qR+aayf eA++arl++s+ ++y +lpp+ + ++  ++ ++a+++f+ +sP
  Cse_sc009314.1_g030.1 298 LTLLLQCAEAVSADNFEEANKMLLEISELSTPYGTSAQRVAAYFSEAMSARLMSSCLGIYTTLPPNVALPQALKKMTSAFQVFNGISP 385
                            579************************************************************************************* PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                            ++kfsh+taNqaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g+    s ++le+tg+rL++fA++lg+pfe
  Cse_sc009314.1_g030.1 386 FVKFSHFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGN----SLDALEATGKRLSDFADKLGLPFE 469
                            ************************************************************....9*********************** PP

                   GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyys 265
                            f++ va+++ +l++e+L+v+++Ea+aV++    h+l+d ++s ++    +L+++++l Pkvv+vveq+++h ++sFl rf+ea++yys
  Cse_sc009314.1_g030.1 470 FSA-VADKVGNLNPERLKVSKREAVAVHWLQ--HSLYDVTGSDNN----TLWFLQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYS 549
                            ***.8*************************9..999999999999....**********************.899************* PP

                   GRAS 266 alfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrvee 353
                            alfdsl +++++eseer++vE++ll++ei+nv+a  g +r  + + +++Wre+le++GFk ++l  +aa+qa lll +++s+gy++ e
  Cse_sc009314.1_g030.1 550 ALFDSLGSSYGEESEERHVVEQQLLSKEIRNVLAIGGPSRSGEVK-FNNWREKLEQCGFKGISLAGNAAAQATLLLGMFPSNGYTLVE 636
                            ***************************************888776.****************************************** PP

                   GRAS 354 esgslvlgWkdrpLvsvSaWr 374
                            ++g+l lgWkd  L+++SaWr
  Cse_sc009314.1_g030.1 637 DKGTLKLGWKDLCLLTASAWR 657
                            ********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    
MVRKRTASDM ELQTAQQRLI RRPNPPLDIV GFGAINDINN VNVNVNVSVN TCSTGDISNC  60
YSTMTLPSLS TSTNIMDSNN PPPLCNFSGL PLFPPPDNQP VMLSPTDDNM TWIDSIIKDL  120
IHTSTDHVSI PHLIHNVREI IHPCNPNLAT LLEYRLRSLT DNPLPPTTLV VDHHHVTPAA  180
ADINSSLSAV VSQQKQHNTS AISRLEDSQQ QQHGQLDWGG VPNVTNDDYN TSGNAPPPSN  240
NQEQQQQQPQ DSPPATAAPA TDQNAVAASA QAAAVLLREK KREEMRQQKR DEQGLHLLTL  300
LLQCAEAVSA DNFEEANKML LEISELSTPY GTSAQRVAAY FSEAMSARLM SSCLGIYTTL  360
PPNVALPQAL KKMTSAFQVF NGISPFVKFS HFTANQAIQE AFEREDRVHI IDLDIMQGLQ  420
WPGLFHILAS RPGGPPFVRL TGLGNSLDAL EATGKRLSDF ADKLGLPFEF SAVADKVGNL  480
NPERLKVSKR EAVAVHWLQH SLYDVTGSDN NTLWFLQRLA PKVVTVVEQD LSHAGSFLGR  540
FVEAIHYYSA LFDSLGSSYG EESEERHVVE QQLLSKEIRN VLAIGGPSRS GEVKFNNWRE  600
KLEQCGFKGI SLAGNAAAQA TLLLGMFPSN GYTLVEDKGT LKLGWKDLCL LTASAWRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein