PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009239.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 196aa MW: 22184.4 Da PI: 7.2985

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009239.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.8	9.4e-33	116	174	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H h+ Cse_sc009239.1_g020.1 116 LDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLSKDEGVVVTTYEGMHSHP 174 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MDSFVSVFPY NNSSSSTSPH LSLNLMNDYS YSNDHNDTYD HLEDDHEHGL VEKNPISSSE 60 EVVPDHVSPT SSGLGNSDGN DMSSASGSRK ISIKKGEKKI RKPKCAFQTR SQVDILDDGY 120 RWRKYGQKAV KNNKFPRSYY RCTYQGCNVK KQVQRLSKDE GVVVTTYEGM HSHPIEKSTD 180 NFEHILTQMQ IYSSAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-58	WRKY family protein