PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009107.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 371aa    MW: 41204.4 Da    PI: 4.3583
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009107.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-194695255
                    AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                           ++ GVr+++ +grWvAeI+d       +  r++lg+f+taeeAa+a+++a+  l+g
  Cse_sc009107.1_g020.1 46 RFVGVRQRP-SGRWVAEIKDtI-----QqIRVWLGTFDTAEEAARAYDEAACLLRG 95
                           789******.7*********33.....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MVRKRQEFEG EEGENSGNSE VVWDQAMNGA MTNAPLVGGA IRPRKRFVGV RQRPSGRWVA  60
EIKDTIQQIR VWLGTFDTAE EAARAYDEAA CLLRGANTRT NFWPCNPSNK SPALSSKITN  120
LLLQRLRARN GANVENGDFG ALMPIQTGDF GALMHHQQFQ DSSSHVQDSN CNQILDIPDA  180
NSDNATNYSN YTSDSFSASY EHGSKDTVID DFRGVDHSFI VDEPKVEGNE EIDLGLTDLL  240
FVDNIGSSMN YSPFDIAEEI TKESYNEADP SMLSEATKRM KFERNISASL YAFNGISECL  300
QMKENPKPEH SSNLGPRNEV ANLAIDKLSE SKDTVMSMES FSSSSSKEVD ESFLWSSFDL  360
PSLDMFFSGS D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-23ERF family protein