PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009055.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23575.6 Da PI: 9.5729 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.6e-19 | 72 | 122 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+GVr ++ +gr+ AeIrd r++lg+f+taeeAa+a++ a+++l+g+ Cse_sc009055.1_g030.1 72 SYRGVRKRP-WGRFSAEIRDrI-----GqCRHWLGTFDTAEEAARAYDSAARRLHGA 122 69*******.**********32.....25**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MNIYIHKPYF QDLPNSSPAT LDGIAAVVGE HVLYPNPTAC TTLTLTPTNT PSKTHTTCTK 60 PQAPKPLTTE KSYRGVRKRP WGRFSAEIRD RIGQCRHWLG TFDTAEEAAR AYDSAARRLH 120 GAKAKTNFEI PSMFPPSQPP PSSTLAAQNK RKCGPSKCHA VTSVDQLFSS SCYMKMNQET 180 GNDKNKDDNE KVDLELDLNL GGGFNKKART TYV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80580.1 | 7e-20 | ERF family protein |