PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009033.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 194aa MW: 22814.6 Da PI: 8.7683 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.4 | 1e-17 | 19 | 71 | 5 | 57 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++t+eq++ Le+ F +++++ e + +L+++lg++ rq+ +W+qN+Ra++k+ Cse_sc009033.1_g020.1 19 KRLTEEQVRLLESSFDSCKKLEPELKHQLSRQLGIPPRQIAIWYQNKRARWKN 71 568************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 104.7 | 7.2e-34 | 18 | 108 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +rl++eqv+lLE+sF++ +kLepe K++l+r+Lg+ prq+a+W+qn+RAR+k++ lE+dy++L+ +++a e+++L+kev++Lr+e Cse_sc009033.1_g020.1 18 SKRLTEEQVRLLESSFDSCKKLEPELKHQLSRQLGIPPRQIAIWYQNKRARWKNQSLEHDYNMLQLRLEATLFETRQLQKEVDQLRAE 105 58*************************************************************************************9 PP HD-ZIP_I/II 91 lke 93 l++ Cse_sc009033.1_g020.1 106 LNK 108 986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MNHSTYHNQK PSQRKHTSKR LTEEQVRLLE SSFDSCKKLE PELKHQLSRQ LGIPPRQIAI 60 WYQNKRARWK NQSLEHDYNM LQLRLEATLF ETRQLQKEVD QLRAELNKVK AEQARYHKYY 120 NNNNNNNNLR SLMDSSFSIC GDQEGGSSSR SLEDDMNNNI YCFGQQVFEV EEMYATASLM 180 GSDLGLFASQ KKLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 3e-27 | HD-ZIP family protein |