PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008975.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 504aa MW: 55014 Da PI: 8.5803

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008975.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.3	1.8e-29	247	305	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gC+v+k+v+r+ +d++++++tYeg+H h+ Cse_sc008975.1_g030.1 247 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCSVRKQVQRCVDDQTILITTYEGTHSHP 305 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MGKDGWRLTF EPVKLLSPRL NSSVKATMYS SDTAASPSSS PKPEDKNSHR EVDFFSTCKL 60 DDDHVVVKKE NSHDNELDVN TGLHLLTTNS DQSSVDDGGS STSQEKHAKN KLTILKAELE 120 KMNTENQRLR GMLTHVSNNY TALQIHISNE IHKQQNQIVE QNSRQLNELV RNSNDSSSEE 180 RTQSGSIKLG DKIGKRNGRE NTPDSDGWVS NKVSRLDTSK NINQPNESAM RKARVSVRAR 240 SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMAVGCSV RKQVQRCVDD QTILITTYEG 300 THSHPLPPAA MAMASTTSAA ASMLLSGSMS SADAMMNPNI LARSILHNTS SIATISSSAP 360 FPTITLDLTH NPNQIQRNNK STQFQAPHQG QLSSQNFAPI ATMPLQSIST NQSKFSDLQL 420 SHDIESSQLL AHNKGQQQTS FADSLSAATA VITADPNFTA ALAAAITSIM SGGNTTTYND 480 SHTSTTTNTN LISNNHKTSN FQGN

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MGKDGWRLTF EPVKLLSPRL NSSVKATMYS SDTAASPSSS PKPEDKNSHR EVDFFSTCKL  60
DDDHVVVKKE NSHDNELDVN TGLHLLTTNS DQSSVDDGGS STSQEKHAKN KLTILKAELE  120
KMNTENQRLR GMLTHVSNNY TALQIHISNE IHKQQNQIVE QNSRQLNELV RNSNDSSSEE  180
RTQSGSIKLG DKIGKRNGRE NTPDSDGWVS NKVSRLDTSK NINQPNESAM RKARVSVRAR  240
SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMAVGCSV RKQVQRCVDD QTILITTYEG  300
THSHPLPPAA MAMASTTSAA ASMLLSGSMS SADAMMNPNI LARSILHNTS SIATISSSAP  360
FPTITLDLTH NPNQIQRNNK STQFQAPHQG QLSSQNFAPI ATMPLQSIST NQSKFSDLQL  420
SHDIESSQLL AHNKGQQQTS FADSLSAATA VITADPNFTA ALAAAITSIM SGGNTTTYND  480
SHTSTTTNTN LISNNHKTSN FQGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-103	WRKY family protein