PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008870.1_g080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 259aa MW: 30254.7 Da PI: 9.7563 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.4 | 9.4e-17 | 19 | 103 | 12 | 99 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++ l +pkkf++eh k + +++l ++ + W++ + + ++g ++l++GW eF++ +Lk gD +vF++ g+s f +v++f++ Cse_sc008870.1_g080.1 19 SKKSLKIPKKFTKEHRRKILLNNDVVLIVSDDKAWSLGC-MVSCDGNIWLQNGWPEFAQHYRLKIGDLLVFEHLGKSLF--HVRIFKE 103 56679**********88888999****************.5666666*************************9998888..9999986 PP | |||||||
2 | B3 | 36.9 | 6.7e-12 | 163 | 251 | 5 | 97 |
-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EE.EEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsW.evkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 ++ +++++s l +p f++++ ++ + +le ++gr+W +k++ k s r + +++Wk+F ++n+L + D++vF++++++e+ Cse_sc008870.1_g080.1 163 MK-ASYTRSYGLNIPLWFMRRYlTSN----EDCVLELSNGRKWgPIKCKGYKISAR-MYGDNWKKFHDENHLVVDDVCVFEMTSETEK 244 44.44555555***********5333....36899********5577744555544.6699********************9998888 PP ..EEEEE CS B3 91 elvvkvf 97 l+v++f Cse_sc008870.1_g080.1 245 VLKVTIF 251 8999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MPTMRPQRKS RKFWMSITSK KSLKIPKKFT KEHRRKILLN NDVVLIVSDD KAWSLGCMVS 60 CDGNIWLQNG WPEFAQHYRL KIGDLLVFEH LGKSLFHVRI FKENDPSFAQ DDHAVSPHTF 120 QETKGKTDLS SENRDKYRST NYKALEAAKA FMADNPNSYI REMKASYTRS YGLNIPLWFM 180 RRYLTSNEDC VLELSNGRKW GPIKCKGYKI SARMYGDNWK KFHDENHLVV DDVCVFEMTS 240 ETEKVLKVTI FHACGNYSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 2e-13 | B3 family protein |