PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008739.1_g040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 205aa    MW: 23128 Da    PI: 9.593
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008739.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.16.7e-322885259
                           --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                           dDgy+WrKYGqK++k+s +prsYY+Ct ++C +kk+vers++dp++++itYeg H h 
  Cse_sc008739.1_g040.1 28 DDGYKWRKYGQKSIKNSSNPRSYYKCTNPHCGAKKQVERSNDDPDTLIITYEGLHLHY 85
                           8******************************************************995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDRGVSGGRV ENSKYILKMK SSSNVMADDG YKWRKYGQKS IKNSSNPRSY YKCTNPHCGA  60
KKQVERSNDD PDTLIITYEG LHLHYMYPFF MFGQSENPDP PTKKFRRFNF GLGAHQRTNK  120
DTEESIRHVC LDQQPSTMLI KDINPPKVAI SSQGLLEDMV PLLIRNPVIY TTNSSKSSSS  180
SSSSSSSSSH TTPPDSPLFS WTPIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.12e-40WRKY family protein