PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008739.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 205aa MW: 23128 Da PI: 9.593 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.1 | 6.7e-32 | 28 | 85 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++k+s +prsYY+Ct ++C +kk+vers++dp++++itYeg H h Cse_sc008739.1_g040.1 28 DDGYKWRKYGQKSIKNSSNPRSYYKCTNPHCGAKKQVERSNDDPDTLIITYEGLHLHY 85 8******************************************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MDRGVSGGRV ENSKYILKMK SSSNVMADDG YKWRKYGQKS IKNSSNPRSY YKCTNPHCGA 60 KKQVERSNDD PDTLIITYEG LHLHYMYPFF MFGQSENPDP PTKKFRRFNF GLGAHQRTNK 120 DTEESIRHVC LDQQPSTMLI KDINPPKVAI SSQGLLEDMV PLLIRNPVIY TTNSSKSSSS 180 SSSSSSSSSH TTPPDSPLFS WTPIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 2e-40 | WRKY family protein |