PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008708.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 244aa    MW: 27607.7 Da    PI: 5.4391
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008708.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.2e-20143193255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            +y+G+r+++ +g+++AeIrdp+++g   r++lg+++ta eAaka+++a+ +++g
  Cse_sc008708.1_g020.1 143 RYRGIRRRP-WGKYAAEIRDPNQRG--SRVWLGTYDTAIEAAKAYDRAAFNMRG 193
                            7********.**********96654..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MAINDEFSTL DIIKQLLLDD IEIPSSSSHP PDALLDIDLS DCFLSDFDSL DWSPSNICCS  60
QSDSSSSETS FFDSPLYVFS FFDSNEVSTT SGFNHFSSLD SVNFSDLVCK PEVTEFTTTT  120
HEVKPSSPKP SMKEQLKTQD ERRYRGIRRR PWGKYAAEIR DPNQRGSRVW LGTYDTAIEA  180
AKAYDRAAFN MRGRKAILNF PLEIGKNLSE NVCNTVVKRS RKRSRDTTDN VAVKKERTNK  240
INNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-30ERF family protein