PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008533.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 1115aa MW: 127087 Da PI: 8.8133

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008533.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	131.3	7.2e-41	92	218	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp G+rF+Ptd el+ +yL +k+++++l+ + i+ + iy +P+d+ + +a+e ewyfF++r++ky++gkr+ r++ g+Wkatg Cse_sc008533.1_g030.1 92 LPIGYRFEPTDLELIRHYLLRKIKNENLPK-NKISVATIYGNHPKDIVgNYPQAKEGEWYFFTSRNRKYTNGKRPDRKAGVGFWKATG 178 699**********************999.77**********8556666777*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 dk + k+ ++g kk+Lv+y+g+ pkg+ktdW+mhey + Cse_sc008533.1_g030.1 179 PDKVINY-KRVKIGGKKSLVYYEGHPPKGTKTDWMMHEYVV 218 9999.9999**************************86 PP
2	NAM	69.9	6.7e-22	572	648	50	127
NAM 50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +a+e ewy F++r+++y +gkr++r++ gyWka dk++++ +g + kk Lv+y+g p+g kt+W+mhey Cse_sc008533.1_g030.1 572 YPQAKEGEWYLFTSRNRRYMNGKRPSRIAGVGYWKACAPDKDITN-NGIKLAAKKPLVYYEGLPPNGIKTNWMMHEYV 648 3345667************************************.999**************************7 PP
3	NAM	133.4	1.6e-41	752	878	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp G+rF+Ptd elv +yL +k+++++l+ + i+ + iy +P+d+ + +a+e ewyfF++r +ky++gkr+nr + gyWkatg Cse_sc008533.1_g030.1 752 LPIGYRFEPTDLELVRHYLLRKIKNENLPK-NKISVATIYGNHPKDIVgNYPQAKEGEWYFFTSRYRKYPNGKRPNRRAGLGYWKATG 838 699**********************999.77**********8556666777*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 dk + + kg ++g kk+Lv+y+g++p+g+kt+W+mhey + Cse_sc008533.1_g030.1 839 PDKVIRH-KGMKIGGKKSLVYYEGHSPDGTKTNWMMHEYVV 878 *99.9999*************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1115 aa Download sequence
MNPETNESNI IDANNANDVD NHDSQRKRKA LDILNDNVNQ NRQVQVQLQY APEIGNIQAQ 60 QQLASTSYNN DHCQSCGCHN NAAMDALYLD SLPIGYRFEP TDLELIRHYL LRKIKNENLP 120 KNKISVATIY GNHPKDIVGN YPQAKEGEWY FFTSRNRKYT NGKRPDRKAG VGFWKATGPD 180 KVINYKRVKI GGKKSLVYYE GHPPKGTKTD WMMHEYVVEG YERERAGKGD MLLDENVLCK 240 IYNKHGRGKE IKEEDDSDEN PGDGLNGNLE AKLPVENGVT EAHQQAPDTN PTNFQVENNV 300 VAQHSNRSSN QTINLVGHNL PNLYSKWPMN PSVENGEKGV QRKFVVPDQR ASSHQDAHPT 360 NFQVVNNTPV QHSNHASHHV ENNLTMMNTN QHMNPGVENR VKEVNRHNMV PDQHMRTVSN 420 QVNENTNRAT HHVVNSFPTM NSHQHMNPNI GNGIEKVQRQ VRVPDQQHRL ITHLDRNPVI 480 FNHVTNHNSI VYSQNMGLPY SHVPANTRPP RPVHMTNSPR MKSQMVNHSR PTRINPHKQL 540 LSNRSPNVPP SWLTHPPPAL NVHVKPDMHG NYPQAKEGEW YLFTSRNRRY MNGKRPSRIA 600 GVGYWKACAP DKDITNNGIK LAAKKPLVYY EGLPPNGIKT NWMMHEYVAT GCEIERTTMN 660 PETNENNITD AIEQANDIDN HDNNQRKRKA LETLNDNVNQ NCQVQVQLQY APEIRNIQAQ 720 QQLASTSYNN GHCQCGMVAM NAAVDALYLD SLPIGYRFEP TDLELVRHYL LRKIKNENLP 780 KNKISVATIY GNHPKDIVGN YPQAKEGEWY FFTSRYRKYP NGKRPNRRAG LGYWKATGPD 840 KVIRHKGMKI GGKKSLVYYE GHSPDGTKTN WMMHEYVVEG YERERAGDKD MMLDDYVLCK 900 IYNKHGRGKE IKEEDDSDEN LDDGLNGNLT AKLPVENGVM EAHQQATDTN PAKLHVENNA 960 GVQHSSRSSN HTINQVGHNL QNLYPNQHMN PSVENGEKGV QSQFVVPDQR ASSHLDAHPT 1020 NFQDANNIPV QHWNHVSHQV ETNLTTMDTN QHVNPGVENR VKEVHTHIMA PDQHMRMVSN 1080 QVQYSNQYAN RVTHHVKTEQ TKFKGKLGSL INNIV

Sequence ? help Back to Top

Protein Sequence Length: 1115 aa Download sequence

MNPETNESNI IDANNANDVD NHDSQRKRKA LDILNDNVNQ NRQVQVQLQY APEIGNIQAQ  60
QQLASTSYNN DHCQSCGCHN NAAMDALYLD SLPIGYRFEP TDLELIRHYL LRKIKNENLP  120
KNKISVATIY GNHPKDIVGN YPQAKEGEWY FFTSRNRKYT NGKRPDRKAG VGFWKATGPD  180
KVINYKRVKI GGKKSLVYYE GHPPKGTKTD WMMHEYVVEG YERERAGKGD MLLDENVLCK  240
IYNKHGRGKE IKEEDDSDEN PGDGLNGNLE AKLPVENGVT EAHQQAPDTN PTNFQVENNV  300
VAQHSNRSSN QTINLVGHNL PNLYSKWPMN PSVENGEKGV QRKFVVPDQR ASSHQDAHPT  360
NFQVVNNTPV QHSNHASHHV ENNLTMMNTN QHMNPGVENR VKEVNRHNMV PDQHMRTVSN  420
QVNENTNRAT HHVVNSFPTM NSHQHMNPNI GNGIEKVQRQ VRVPDQQHRL ITHLDRNPVI  480
FNHVTNHNSI VYSQNMGLPY SHVPANTRPP RPVHMTNSPR MKSQMVNHSR PTRINPHKQL  540
LSNRSPNVPP SWLTHPPPAL NVHVKPDMHG NYPQAKEGEW YLFTSRNRRY MNGKRPSRIA  600
GVGYWKACAP DKDITNNGIK LAAKKPLVYY EGLPPNGIKT NWMMHEYVAT GCEIERTTMN  660
PETNENNITD AIEQANDIDN HDNNQRKRKA LETLNDNVNQ NCQVQVQLQY APEIRNIQAQ  720
QQLASTSYNN GHCQCGMVAM NAAVDALYLD SLPIGYRFEP TDLELVRHYL LRKIKNENLP  780
KNKISVATIY GNHPKDIVGN YPQAKEGEWY FFTSRYRKYP NGKRPNRRAG LGYWKATGPD  840
KVIRHKGMKI GGKKSLVYYE GHSPDGTKTN WMMHEYVVEG YERERAGDKD MMLDDYVLCK  900
IYNKHGRGKE IKEEDDSDEN LDDGLNGNLT AKLPVENGVM EAHQQATDTN PAKLHVENNA  960
GVQHSSRSSN HTINQVGHNL QNLYPNQHMN PSVENGEKGV QSQFVVPDQR ASSHLDAHPT  1020
NFQDANNIPV QHWNHVSHQV ETNLTTMDTN QHVNPGVENR VKEVHTHIMA PDQHMRMVSN  1080
QVQYSNQYAN RVTHHVKTEQ TKFKGKLGSL INNIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-42	NAC family protein