PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008364.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 347aa    MW: 38703.9 Da    PI: 5.5991
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008364.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH283.9e-09152201255
                            HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            ++ h e Er RR+++ + +e L   lP++     +K +Ka+i+e++   IksL+
  Cse_sc008364.1_g030.1 152 KVIHAEGERERRKKMTDLLEILHGSLPQL----PTKITKAAIVEETASTIKSLE 201
                            6779999*********************6....39*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MANEMIYEED WWKNLLLFVS DENSSDEIML LETHENTQGE KSLGPNIVRD EIMVHGPNRN  60
SIGEEKSLGA NLVSDEIMVH RPNGNTLGEK SIVPNIATNE KYAEELDMGL IGGHDSGPNE  120
VDDGSVRARK KGKFVVTEND GTGQTDHRTS KKVIHAEGER ERRKKMTDLL EILHGSLPQL  180
PTKITKAAIV EETASTIKSL EETRVSLEKH ILERLSTDTR MAPPAPSQTR VIENDATMMI  240
KDAMLGPRSG FLTNWCSPNI SLSVFGANAS VNICSVRNAT FFSSICYIIK KHNVDVLAAS  300
VHSDQAKTMY MMTLRVNAPI EIAHIFRCED LFKLAVNEIN YAYHQIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.18e-24bHLH family protein