PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008327.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 320aa MW: 36569.2 Da PI: 7.5165

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008327.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	67.7	1.8e-21	128	189	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK++ +s++ rsY+rCt++ gC ++k+v++ + p +++Y g+H+++ Cse_sc008327.1_g030.1 128 VDDGHAWRKYGQKKILNSKHQRSYFRCTYKfdqGCLATKQVQQIRASPPKYKTIYCGDHTCK 189 59*************************9999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MKSSSWPESV PSNRIQAIQT LTEGQEMINI LCEMLLWPEE IDSGPISDGL VARIQGMFEN 60 TLSIMSSCSS NESIHLMKSD AHSPCKSDEE KSKYSYIHKT ITPAKIKRGG YKRSKNTWTS 120 TQIASVLVDD GHAWRKYGQK KILNSKHQRS YFRCTYKFDQ GCLATKQVQQ IRASPPKYKT 180 IYCGDHTCKN LQRAPTIVLD FPEPRDTSIC LSFDKKGYTE NKHVEPNFPS INQELKEGFP 240 FSDCLRHNEP SFSNNYLSVE QNTHTSRRPL EPISMTPFGH GDIISSNAYS YTASTHGHGI 300 EMEQMYVRND FDDFPYELCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	1e-32	WRKY family protein