PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc008181.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 25972 Da PI: 7.3358 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.3 | 1.9e-18 | 84 | 134 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr++ g+WvAeIr p++ r+r++lg+++++++Aa a+++a+ l+ge Cse_sc008181.1_g020.1 84 LYRGVRQRN-HGKWVAEIRLPCN---RTRVWLGTYDSPKMAAYAYDQAACLLRGE 134 59****999.8*********965...4***********************99996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
LFSSVSKVPK NTTSWINTTC TNSSTIDSVY SNYPPSPVFH PQSGSSVYLQ QRDQLFTLSE 60 GFDSEQKFTT SPDGMINSST KRKLYRGVRQ RNHGKWVAEI RLPCNRTRVW LGTYDSPKMA 120 AYAYDQAACL LRGENARLNF CEEAQIGLIG DANKLKAIKT AVGNKIRVAI KKENCKKREE 180 NNHVANMNGS YMDSPENGFS GEDPGFDVAA DDYFLTGVPS YDPDLIWEIL DN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64380.1 | 8e-30 | ERF family protein |