PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008105.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 791aa MW: 91584.9 Da PI: 7.887

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008105.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60	7.2e-19	56	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y+k+ GF+ r+ ++k k t + f+Cs++g +e+++ k ++k+ r+r++ r+gC Cse_sc008105.1_g020.1 56 NFYVAYGKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSNGKsgdsvtdndiseqseisddshrfgdvKKKQTRKRTSFRCGC 143 6***************************************999999*******************99899999999** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 a+l++kk + +evtk+e HnH+l+ Cse_sc008105.1_g020.1 144 SASLTIKKI-GNIYEVTKFEDGHNHPLV 170 *****.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
MLTENDSVSA DVKTVRIRDH VGFYVCGKDG TRTWYPDCLE KPIEGCQFIS IDQAYNFYVA 60 YGKKGGFDCR RGGQYKAKGF SDATLKYFYC SRQGLNEDSN GKSGDSVTDN DISEQSEISD 120 DSHRFGDVKK KQTRKRTSFR CGCSASLTIK KIGNIYEVTK FEDGHNHPLV AEKDMIFWKN 180 SRKMGYTKQH FLYQISNANF GPAVGFRLMK QVYGGFDRVG TTVIECKNQK KKISVFIGDQ 240 DAQMAVEKLL SRKLNSLGDD DKLVGLFWAD EEAIKDYASF GDIVSFDATF RSNKYEMVFV 300 PFTGINHHNR CLTFASGLLA DESAGAYIWL LEQFKEAFGK EPEVVITDQD PSMKIAIEEC 360 FPNTRHRLYQ ILPEEFEREW DRMINDFELS DNKWLGDMFN MRERWIPAYL RDVHMAGLMR 420 TTSRSESENH FFGKWTSPHL TLVEFLSHYD TAIDPHLTLV EFLSHYNTAI EYQRYIERKN 480 DHDSRYKTPK FKTEHPMEKE ACKLYTRTLF FDVQDEILGS YKYCIGLSVV QADNMEKYEI 540 RDTEFQNRKS GDNDFAVYQK YAILDTEFRN GKSGDNDFSV YQSEMIVQCS CNRYESYELL 600 CRHAFYVLRM NNVKEFPRNY LKKRWLKNTK PSRYALPRII GASDLVRNEV LDMYEIFESI 660 VDRLVHDLSK MHIYKDKLQE LLNQAVIDIP TVPKCDGKAV MSSMLGVKEP EKKSINNPGK 720 SKTKGTGCFS SRRLKDVKTE ERAGHGGISL NQIGRSTYQP KSTFPEWQKI RLSVITELRN 780 TELRKVVLSL T

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

MLTENDSVSA DVKTVRIRDH VGFYVCGKDG TRTWYPDCLE KPIEGCQFIS IDQAYNFYVA  60
YGKKGGFDCR RGGQYKAKGF SDATLKYFYC SRQGLNEDSN GKSGDSVTDN DISEQSEISD  120
DSHRFGDVKK KQTRKRTSFR CGCSASLTIK KIGNIYEVTK FEDGHNHPLV AEKDMIFWKN  180
SRKMGYTKQH FLYQISNANF GPAVGFRLMK QVYGGFDRVG TTVIECKNQK KKISVFIGDQ  240
DAQMAVEKLL SRKLNSLGDD DKLVGLFWAD EEAIKDYASF GDIVSFDATF RSNKYEMVFV  300
PFTGINHHNR CLTFASGLLA DESAGAYIWL LEQFKEAFGK EPEVVITDQD PSMKIAIEEC  360
FPNTRHRLYQ ILPEEFEREW DRMINDFELS DNKWLGDMFN MRERWIPAYL RDVHMAGLMR  420
TTSRSESENH FFGKWTSPHL TLVEFLSHYD TAIDPHLTLV EFLSHYNTAI EYQRYIERKN  480
DHDSRYKTPK FKTEHPMEKE ACKLYTRTLF FDVQDEILGS YKYCIGLSVV QADNMEKYEI  540
RDTEFQNRKS GDNDFAVYQK YAILDTEFRN GKSGDNDFSV YQSEMIVQCS CNRYESYELL  600
CRHAFYVLRM NNVKEFPRNY LKKRWLKNTK PSRYALPRII GASDLVRNEV LDMYEIFESI  660
VDRLVHDLSK MHIYKDKLQE LLNQAVIDIP TVPKCDGKAV MSSMLGVKEP EKKSINNPGK  720
SKTKGTGCFS SRRLKDVKTE ERAGHGGISL NQIGRSTYQP KSTFPEWQKI RLSVITELRN  780
TELRKVVLSL T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-77	FAR1 family protein