PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007915.1_g030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 345aa    MW: 39819.1 Da    PI: 7.1068
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007915.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.26.3e-27162220259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            +D ++WrKYGqK++kgs +prsYYrC+s+  C+++++ve+s +d ++ + tY+ +Hnh+
  Cse_sc007915.1_g030.1 162 SDPWAWRKYGQKPIKGSIYPRSYYRCSSSkACMARRQVEQSCTDSSIYILTYTADHNHP 220
                            699************************9989***************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MADWGLHALL RPNEYEHQDH HQQHHHHVHD DGFGSIDIKK EYDQALLFCY PHLFDNNSHD  60
DGATTSAIER VGARDELNQL YKPFYNPVYD NEHEFRRPTL PENDLKKTIQ HQDFDQEVQQ  120
DKKIKNFSGS SSNISQLAPK LKKRKNQQKR VVVKVTADGL SSDPWAWRKY GQKPIKGSIY  180
PRSYYRCSSS KACMARRQVE QSCTDSSIYI LTYTADHNHP QPTRRNSLAG INRNRFKATP  240
KSPTLSDDGS KVLTKLKVDS PFNSPTTPSA SSMDDEVLQQ PNIKQETTFY NKYDNQGHTM  300
MSEFNDDELM LFSDDFFEGL EDLVGYKTET SSQISSNKQF PRVFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-37WRKY family protein