PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007742.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 410aa    MW: 46286.3 Da    PI: 9.683
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007742.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.52.4e-32167222359
                            -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            DgynWrKYGqK+vkgse+prsYY+Ct+++C vkkkvers  d++++ei+Y+g+Hnh 
  Cse_sc007742.1_g060.1 167 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCLVKKKVERSL-DGEITEIVYKGDHNHV 222
                            9***************************************.***************6 PP
2WRKY103.98.5e-33346403259
                            --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            +Dg++WrKYGqK+v+g+++prsYY+Ct  +C+v+k+ver+a++p+++++tYeg+Hnhe
  Cse_sc007742.1_g060.1 346 SDGFRWRKYGQKVVRGNPYPRSYYKCTVVKCNVRKHVERAADNPNIFITTYEGKHNHE 403
                            7********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MELKEAERIV VAKPVASRPT LSNFKYFSEF FPDDTNGSPT SEPIITAIRP KTVRFKPVTS  60
SPLDMVSSQA ELPVTQACYS SDKILKLNHT SPLLYRPLAK TISKETIRML ANMGTCNASK  120
EYTLAQNAES QPEIVKDINL PNVTPGKSGN DKRPQLYKNN IDRPSYDGYN WRKYGQKQVK  180
GSEYPRSYYK CTHPNCLVKK KVERSLDGEI TEIVYKGDHN HVKPRLPRRH AFDGTSQDSN  240
RQLPNNQINE TTEHLGSSSH LNDLVKVQES YNHVSNEAFN ASIPKFDCSC GVARVQDGGS  300
KVIMERVDDI PAIKRRKGLN QSNETFVGGL QVPQVVHDGP DSEAISDGFR WRKYGQKVVR  360
GNPYPRSYYK CTVVKCNVRK HVERAADNPN IFITTYEGKH NHETPIKKAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-89WRKY family protein