PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007714.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 520aa MW: 57011.7 Da PI: 7.3106

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007714.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.1	8.9e-29	243	299	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK vkg++f rsYY+Ct+++Cp++k+vers+ d++++ei Y +H+h+k Cse_sc007714.1_g050.1 243 DGYNWRKYGQKLVKGNTFVRSYYKCTYSNCPARKQVERSH-DGNITEINYLWKHEHPK 299 9*************************************.*************85 PP
2	WRKY	105.9	2e-33	419	476	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK vkg+++prsYYrC+sagCp+kk+ver+++d+k+v++tYeg+H+h+ Cse_sc007714.1_g050.1 419 NDGFRWRKYGQKLVKGNPNPRSYYRCSSAGCPAKKHVERASHDEKMVITTYEGRHDHD 476 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MSYPITKHLK SISTNLTTPP IFTQFNRKDS NKTISKCNQD GNEITMMDKT PENLELTNEP 60 KSKDQSSPTK DQSSLSKDQS SLSKDQSSPS KEQSSPSKEQ SSLSKDQTSL SDQEIKSESI 120 IAKESHDSGS HASHLNQEGS STTVLPDKEL DTQNDSPAIH TGITGSESIQ EGNAKAIIPI 180 NSPNTSPRTP ASEHDRENFI VSLRPEKVLD KLPLRRHADT VSPAAQSESG VTFSKLPEKP 240 TGDGYNWRKY GQKLVKGNTF VRSYYKCTYS NCPARKQVER SHDGNITEIN YLWKHEHPKP 300 PHTLLKGSAF VLPVQSTGSD DLSLTTSEGR SSVLPAKSHD PEASETENRQ LQVVPSSQNV 360 AEGAVSQSND MRSEVNNDVS SDAKRQKRDS SNMHEGISTK TNCEPRVVVQ TTSAVDIIND 420 GFRWRKYGQK LVKGNPNPRS YYRCSSAGCP AKKHVERASH DEKMVITTYE GRHDHDMPAA 480 GRTVTPNMSG TGTGTTSVDN DGSRPTESGA MDMVLHVSAT

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MSYPITKHLK SISTNLTTPP IFTQFNRKDS NKTISKCNQD GNEITMMDKT PENLELTNEP  60
KSKDQSSPTK DQSSLSKDQS SLSKDQSSPS KEQSSPSKEQ SSLSKDQTSL SDQEIKSESI  120
IAKESHDSGS HASHLNQEGS STTVLPDKEL DTQNDSPAIH TGITGSESIQ EGNAKAIIPI  180
NSPNTSPRTP ASEHDRENFI VSLRPEKVLD KLPLRRHADT VSPAAQSESG VTFSKLPEKP  240
TGDGYNWRKY GQKLVKGNTF VRSYYKCTYS NCPARKQVER SHDGNITEIN YLWKHEHPKP  300
PHTLLKGSAF VLPVQSTGSD DLSLTTSEGR SSVLPAKSHD PEASETENRQ LQVVPSSQNV  360
AEGAVSQSND MRSEVNNDVS SDAKRQKRDS SNMHEGISTK TNCEPRVVVQ TTSAVDIIND  420
GFRWRKYGQK LVKGNPNPRS YYRCSSAGCP AKKHVERASH DEKMVITTYE GRHDHDMPAA  480
GRTVTPNMSG TGTGTTSVDN DGSRPTESGA MDMVLHVSAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	8e-69	WRKY family protein