PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007602.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 165aa MW: 18116 Da PI: 10.4734 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 28.6 | 2.9e-09 | 99 | 123 | 3 | 30 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa 30 D+ +WrKYGqK++kgs +pr rC a Cse_sc007602.1_g060.1 99 DENSWRKYGQKPIKGSLHPR---RCKIA 123 8889****************...56655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MMYRRSSNSG MSLSSGISLN FDSSTCTPTM SSNRLIGSSR SADQATYQHK KRCSVRGDDG 60 SVKCGSSGRC HCSKKRKHRI KRSIKVPAIS NKLADIPPDE NSWRKYGQKP IKGSLHPRRC 120 KIANYCVLTG MLFCCALCIS GTSTCEYMFI VAVGVLMASA GHRKH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 8e-25 | WRKY family protein |