PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007425.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

E2F/DP

Protein Properties

Length: 391aa MW: 43943.4 Da PI: 6.7031

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007425.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.4	2.2e-27	138	203	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l+++ ++g+++ln++a+ L dv ++RRiYDi+NVLe+++++ek+ kn+i+wkg Cse_sc007425.1_g030.1 138 RYDNSLGLLTKKFVSLIQEDKDGVLDLNKAATML---DV--QKRRIYDITNVLEGIGIVEKSTKNHIQWKG 203 689*****************************.....****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MSIAAADDLN LSLQTSTTTM HLPKQSFYNN PNPPRPILPR PVANHNPNPP KPILPRPTNN 60 LPFFLLPQKQ PIKCEAVNPN PILQGGIKTE VAYDHSFQPL PCGLTKKYKK LKASRPAKSG 120 NHESNADLGD LNVAGTCRYD NSLGLLTKKF VSLIQEDKDG VLDLNKAATM LDVQKRRIYD 180 ITNVLEGIGI VEKSTKNHIQ WKGHKTSSPD NPVNHAKRLK AELEHLYAEE SRLDESIRKT 240 QDCLKSMEFD HKIQKHLYLT GEDFNLPCFK NQTLIAISAP HATSIEVPDP DQDYDFYQKQ 300 YNLTVRSHTG PIDVYLVSES EEPTSSSNVT ARQGGSWVNT SHQQMDLNSP DSVDYQSYGI 360 KKIIPSQNDI ADDYWFWSNP EVSATELWGT D

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MSIAAADDLN LSLQTSTTTM HLPKQSFYNN PNPPRPILPR PVANHNPNPP KPILPRPTNN  60
LPFFLLPQKQ PIKCEAVNPN PILQGGIKTE VAYDHSFQPL PCGLTKKYKK LKASRPAKSG  120
NHESNADLGD LNVAGTCRYD NSLGLLTKKF VSLIQEDKDG VLDLNKAATM LDVQKRRIYD  180
ITNVLEGIGI VEKSTKNHIQ WKGHKTSSPD NPVNHAKRLK AELEHLYAEE SRLDESIRKT  240
QDCLKSMEFD HKIQKHLYLT GEDFNLPCFK NQTLIAISAP HATSIEVPDP DQDYDFYQKQ  300
YNLTVRSHTG PIDVYLVSES EEPTSSSNVT ARQGGSWVNT SHQQMDLNSP DSVDYQSYGI  360
KKIIPSQNDI ADDYWFWSNP EVSATELWGT D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.1	3e-79	E2F/DP family protein