PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007368.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 297aa    MW: 33480.2 Da    PI: 7.9049
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007368.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.16.8e-091697790
                   FAR1  7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                           A+++GF ++k ++k+    g  ++ +f Cs++g++++e  + ++ +r++++ +++C   l  k  k +  w +    l HnH+++
  Cse_sc007368.1_g040.1 16 AESIGFLIVKGRTKTD--RGYKYSIEFLCSRHGTSAREGLE-DELERQTSTAKINCPFILLTKFIKgRTGWILRVKCLRHNHDFV 97
                           899********98888..6667****************999.8888899999************9988999999999*****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MSKGGVALTD WVQSTAESIG FLIVKGRTKT DRGYKYSIEF LCSRHGTSAR EGLEDELERQ  60
TSTAKINCPF ILLTKFIKGR TGWILRVKCL RHNHDFVDSF HGCSQAMRLK ESELVLVKQL  120
TKQHVAPRII LSSLKESDPN NVFGIKTIYN AQDKIRRASR GDLTPIQLLL VHFQRQGYTY  180
YPRISAPAPV LPHLLLQESD DIQWRDIHCV NNTPARVESP DYVPSSPSYV PPSPAISPAA  240
DEENFIHRPP VLPHLLLQPS RTLDASLELA RNPVDHACQS SGILYELIDD INNLHVE