PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007362.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 256aa    MW: 28654.3 Da    PI: 6.9138
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007362.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH261.6e-08161201954
                            HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                             r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Cse_sc007362.1_g050.1 161 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 201
                            699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDIDFLKSIS DDQTEMMMMM MQLEKLPDFC GIYGEDHNPS TEFTDQGSSS STNPNNNPNM  60
SHFLEDSHFA NPSTTICFGS PTQTIPTGEM QFLSSSRWGS DGEGECEGRL NVEQKRNSMA  120
AMREMIFRIA AMQPIHIDPE SVKPPKRRNV KISKDPQSVA ARHRRERISE RIRILQRLVP  180
GGTKMDTASM LDEAIHYVKF LKNQVQTLEK AGENRQPSAP AGIGFPVPMT SGNHIHMGTS  240
SKGYHQQSGQ HHYLGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.17e-44bHLH family protein