PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007308.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 1020aa MW: 116946 Da PI: 6.6444

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007308.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	24.4	6e-08	860	900	4	44
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 ++s ed+++++ +++k+AAk+Lgv+l++LKr+ ++G+ W Cse_sc007308.1_g010.1 860 KLSREDIEQHYGKTMKKAAKDLGVSLSTLKRKHNRLGMCGW 900 7999***************************9888887666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1020 aa Download sequence
MYDYGEDFIK SFPTYRLHYK PEPFSDGLWV LSNKDEGYES NSYSSDDAGT RMMIRAKILS 60 AFSKMNYSSL IAQFWAPVTI GGKHQLSTSG QPFAINELSS DFKKYRRFCV WYPYDIDVNS 120 KFRGTPASAF LNRFAEIASM YGNVYHEVDP LLRNAFQECG LRTSFMMPIY CPSQTSSSSD 180 CIGVIECSAL SHPYRANLFN EMKNKIKVGS GSECAQCPRS YTIQGKYAFS KYAHNNKLKL 240 SSFVTSLSYC EKLHVFKYFT LVKQTINGLK LARDQIQEAL KIVCQSHQIT LAQVWIASLD 300 ENHVHFSSSL EEAQTRPLSG LKLTGYKDSD IDWTSQNYYD ACDLIPLQPG EEFILKTLQD 360 YEPRFCKNIL KLGSYKLMGW DWYHATLECM VLTICMRCIH TGDFNYVFEF LWEYNSFNPI 420 LLEEILLEIK RCLPNFKFAS GDLGTRMIHD KLKSAFSKVS NGGELIVQFW APITSGNRLV 480 LSTSGQPFAV SVFGEGLEEY RGRCVGYECN IDMNNDNNKV IKDDIEQHED HHPMTMISGP 540 PTNAFLNRLP EAVLDTKNHH EGSLMRYASD CGLWTSYTLP IGCPQYYSSC IGVVECSSIS 600 SINLEIVNTM NRALEQEGLN VFNVQDRIPY NSINGLTLVR DEIQVALKSV CESHKIGVAQ 660 VWISYEDENH VPFSFSSEDT QTTRRLALKL TGYNSVDEDS TLSNWRFKEY YDACDMVPLK 720 KGEELVEKTL QDYQPRFCEN ISQLGTDTLM GWWXIGTGDF NCAFEFIWHH NPNYVLLLEA 780 LLLTLKRCLP RFKFASGAEL GDQLHVIDVD NSTKSETKFF KIFKERRLSP IPEEIDKGKK 840 PMVVNYNARS KEKHDTTEIK LSREDIEQHY GKTMKKAAKD LGVSLSTLKR KHNRLGMCGW 900 QGPDLLQRKA YNSNKKQRNE NHTHEKDNGV IQDPSPVKRN ENTVIKAEYA DDIIKVRLGN 960 SEATFLTVEN EIGKVFKLKH GNFKIKYLDE DEEWILMNSD QDLSECMQNS RRLRVLLHNQ

Sequence ? help Back to Top

Protein Sequence Length: 1020 aa Download sequence

MYDYGEDFIK SFPTYRLHYK PEPFSDGLWV LSNKDEGYES NSYSSDDAGT RMMIRAKILS  60
AFSKMNYSSL IAQFWAPVTI GGKHQLSTSG QPFAINELSS DFKKYRRFCV WYPYDIDVNS  120
KFRGTPASAF LNRFAEIASM YGNVYHEVDP LLRNAFQECG LRTSFMMPIY CPSQTSSSSD  180
CIGVIECSAL SHPYRANLFN EMKNKIKVGS GSECAQCPRS YTIQGKYAFS KYAHNNKLKL  240
SSFVTSLSYC EKLHVFKYFT LVKQTINGLK LARDQIQEAL KIVCQSHQIT LAQVWIASLD  300
ENHVHFSSSL EEAQTRPLSG LKLTGYKDSD IDWTSQNYYD ACDLIPLQPG EEFILKTLQD  360
YEPRFCKNIL KLGSYKLMGW DWYHATLECM VLTICMRCIH TGDFNYVFEF LWEYNSFNPI  420
LLEEILLEIK RCLPNFKFAS GDLGTRMIHD KLKSAFSKVS NGGELIVQFW APITSGNRLV  480
LSTSGQPFAV SVFGEGLEEY RGRCVGYECN IDMNNDNNKV IKDDIEQHED HHPMTMISGP  540
PTNAFLNRLP EAVLDTKNHH EGSLMRYASD CGLWTSYTLP IGCPQYYSSC IGVVECSSIS  600
SINLEIVNTM NRALEQEGLN VFNVQDRIPY NSINGLTLVR DEIQVALKSV CESHKIGVAQ  660
VWISYEDENH VPFSFSSEDT QTTRRLALKL TGYNSVDEDS TLSNWRFKEY YDACDMVPLK  720
KGEELVEKTL QDYQPRFCEN ISQLGTDTLM GWWXIGTGDF NCAFEFIWHH NPNYVLLLEA  780
LLLTLKRCLP RFKFASGAEL GDQLHVIDVD NSTKSETKFF KIFKERRLSP IPEEIDKGKK  840
PMVVNYNARS KEKHDTTEIK LSREDIEQHY GKTMKKAAKD LGVSLSTLKR KHNRLGMCGW  900
QGPDLLQRKA YNSNKKQRNE NHTHEKDNGV IQDPSPVKRN ENTVIKAEYA DDIIKVRLGN  960
SEATFLTVEN EIGKVFKLKH GNFKIKYLDE DEEWILMNSD QDLSECMQNS RRLRVLLHNQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	784	788	TLKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	2e-16	Nin-like family protein