PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007277.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 558aa MW: 64879.9 Da PI: 8.5514

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007277.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24	1.3e-07	54	106	1	48
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....t 48 +fY +Y+k+ GF+ r+ ++k k t + f+Cs++g +e+++ k + Cse_sc007277.1_g010.1 54 NFYVAYGKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSNGKsgdsiN 106 6****************************************999887444430 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MAMFRFCAYV ETVRIRDHVG IYVCGKDGTR TWYPDCLEKP IEGCQFISVD QAYNFYVAYG 60 KKGGFDCRRG GQYKAKGFSD ATLKYFYCSR QGLNEDSNGK SGDSINDNDI SEQSEISDDS 120 YRFGDVKQTR KRTSFSAGAY IWLLEQFKEA FGKEPEVVIT DQDPSMKISI EECFPNTRHR 180 LCMWHIMQKL TTKVGTALCN RTDFKQRICD IVSTDQILPE EFEREWDRMI NDFELSDNKW 240 LGDMFNMRER WIPAYLRDVH MAGLMRTTSR SESENHFFGK WTSPHLTLVE FLSHYDTAIE 300 YQRYIERKND HDSRYKTPKF KTELPMEKEA CKLYTRTLFF DVQDEIFASY KYCIGLSVVQ 360 AENMEKYAIR DTEFQNGKSC DNDFAVYQVD FCKSEMIVQC SCNPYESYGL LCRHAFYVLR 420 MNNVKEFPRK YLKKRWLKNT KPSRSALPRI IAVIDIPTVP KCDGKAVMSS MLGVKEPEKK 480 SINNPGKSKT KGTGCFSRFK PIAEVSAEEL SKRRACGVCG QNEGHNSRTC TRKMVETTPS 540 KKKKQQEQPR REGLRQST

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MAMFRFCAYV ETVRIRDHVG IYVCGKDGTR TWYPDCLEKP IEGCQFISVD QAYNFYVAYG  60
KKGGFDCRRG GQYKAKGFSD ATLKYFYCSR QGLNEDSNGK SGDSINDNDI SEQSEISDDS  120
YRFGDVKQTR KRTSFSAGAY IWLLEQFKEA FGKEPEVVIT DQDPSMKISI EECFPNTRHR  180
LCMWHIMQKL TTKVGTALCN RTDFKQRICD IVSTDQILPE EFEREWDRMI NDFELSDNKW  240
LGDMFNMRER WIPAYLRDVH MAGLMRTTSR SESENHFFGK WTSPHLTLVE FLSHYDTAIE  300
YQRYIERKND HDSRYKTPKF KTELPMEKEA CKLYTRTLFF DVQDEIFASY KYCIGLSVVQ  360
AENMEKYAIR DTEFQNGKSC DNDFAVYQVD FCKSEMIVQC SCNPYESYGL LCRHAFYVLR  420
MNNVKEFPRK YLKKRWLKNT KPSRSALPRI IAVIDIPTVP KCDGKAVMSS MLGVKEPEKK  480
SINNPGKSKT KGTGCFSRFK PIAEVSAEEL SKRRACGVCG QNEGHNSRTC TRKMVETTPS  540
KKKKQQEQPR REGLRQST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-48	FAR1 family protein