PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007254.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 698aa MW: 76908.7 Da PI: 6.1701

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007254.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	477	514	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + Cse_sc007254.1_g020.1 477 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 514 664459******************************88 PP
2	BELL	83.5	2.6e-27	360	409	23	72
BELL 23 YkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 Y++y+eq+q+v++sF+ + g+g+a pYt+lA+ka+SrhFrcLkdaia q+ Cse_sc007254.1_g020.1 360 YNHYCEQMQMVVNSFDLILGYGAAVPYTALAQKAMSRHFRCLKDAIAAQL 409 ***********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
NDEFVMEVAR FEEEEHHKNK FASKSMSHDY IFNFSHGFER ASQDQQQHQL ANQIRRDKLR 60 VQGFEPPPGS LVGLEDEGGV GGGGIPAVYE TGAGMLSEMF NYQTGTSATE LLENQINYQQ 120 HRNQRGENWY GNSAQAMQLF LMNPSNESPS SQSSSHHHHN PSTSSSTLHM LLPNNVPSST 180 PTTLHHQQSF GSTSGSGQGQ FGPSTQFAWV PPSGTSGVDS HGLSLSLSSN LQHLEGTKVE 240 ELRIGDDPTT AMLYFNQGGS GGSDPYRNLP LQGVGGGGVL GPTHHAIHVG YGSSSLGVVK 300 ALRTSRYVKA AQELLEEFCS VGRGQFKMNK SGSKLNTNQN PSNSGGGGSS ASKDLPPLSY 360 NHYCEQMQMV VNSFDLILGY GAAVPYTALA QKAMSRHFRC LKDAIAAQLK HSCELLGEKD 420 VGTSGVTKGE TPRLKMLEQS LRQQRAFHQM GMMEPEAWRP QRGLPERSVN ILRAWLFEHF 480 LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMV EEMYQQESKE EGDQNNSPPQ 540 LDEDQDNEDE HQEHQEHDII NTTRYNTFRD NTMNDDHQSS PSSVAAMPPP TTTHAKRSSI 600 NESENDTSIL AINTQQQHCF SESSAAAAPS MSYSYSPSTM AQPPFDDADP CKRNSMLHAD 660 DADMGSTLIR YGPTSGDVSL TLGLRHTGNM PEKTSFFS

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

NDEFVMEVAR FEEEEHHKNK FASKSMSHDY IFNFSHGFER ASQDQQQHQL ANQIRRDKLR  60
VQGFEPPPGS LVGLEDEGGV GGGGIPAVYE TGAGMLSEMF NYQTGTSATE LLENQINYQQ  120
HRNQRGENWY GNSAQAMQLF LMNPSNESPS SQSSSHHHHN PSTSSSTLHM LLPNNVPSST  180
PTTLHHQQSF GSTSGSGQGQ FGPSTQFAWV PPSGTSGVDS HGLSLSLSSN LQHLEGTKVE  240
ELRIGDDPTT AMLYFNQGGS GGSDPYRNLP LQGVGGGGVL GPTHHAIHVG YGSSSLGVVK  300
ALRTSRYVKA AQELLEEFCS VGRGQFKMNK SGSKLNTNQN PSNSGGGGSS ASKDLPPLSY  360
NHYCEQMQMV VNSFDLILGY GAAVPYTALA QKAMSRHFRC LKDAIAAQLK HSCELLGEKD  420
VGTSGVTKGE TPRLKMLEQS LRQQRAFHQM GMMEPEAWRP QRGLPERSVN ILRAWLFEHF  480
LHPYPSDADK HLLARQTGLS RNQVSNWFIN ARVRLWKPMV EEMYQQESKE EGDQNNSPPQ  540
LDEDQDNEDE HQEHQEHDII NTTRYNTFRD NTMNDDHQSS PSSVAAMPPP TTTHAKRSSI  600
NESENDTSIL AINTQQQHCF SESSAAAAPS MSYSYSPSTM AQPPFDDADP CKRNSMLHAD  660
DADMGSTLIR YGPTSGDVSL TLGLRHTGNM PEKTSFFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-119	TALE family protein