PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007212.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 339aa MW: 36527.4 Da PI: 9.0723

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007212.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.5	1.1e-36	79	137	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e l+cprC+stntkfCy+nnysl+qPr+fCk+CrryWtk GalrnvPvGgg+rkn+++ Cse_sc007212.1_g030.1 79 EPGLNCPRCNSTNTKFCYFNNYSLTQPRHFCKTCRRYWTKNGALRNVPVGGGCRKNRRN 137 56789***************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MVFSSHVPYL DHHNWHLQLQ QSNLQHTTVG DGENPNLSQP PPPPPLGGGG SGGGASGEGS 60 IRPGSMVDRA RMARIPMPEP GLNCPRCNST NTKFCYFNNY SLTQPRHFCK TCRRYWTKNG 120 ALRNVPVGGG CRKNRRNNKN RSSKSPSQTG PKSVSESPSR CSAETMTSNQ LPHPPSLQLP 180 FMSSLSQYGG VGSNITSNLG GFQAQHEMGN FQLGSGSSNG NNFNNVLSIG GVESWRLPFL 240 AGFEVPNNTN LFHYQSEGVA EAPPSSIVGG NIRIPNTGID NTQVDPPVKM EDNRNLSLSR 300 QFLGVSSETT NQQSWAGNAW ADYSGVNSTS STTPTTSFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	6e-38	Dof family protein