PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007182.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 470aa MW: 52039.2 Da PI: 6.2352

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007182.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.3e-11	286	328	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L Cse_sc007182.1_g030.1 286 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 328 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MLPENDTAWM DNHQDETSSW TPTTTTNHHQ PPCTNNQNTY TSLTTLKNML ETEWFQNNNN 60 NNLNLTSTDT NPMFLPLDSS SSCSPSQSHS HSHFTQFPFI PTKYNNNTNL NLTAFDLPFE 120 FGCDPSFISN NPPTNFLNFP TQQMATSSEY TETSYHDDLT GTGTGFTGFE PVNPVFPVRS 180 KVLRPLEVSP PVGAQPTLFQ KRAALRQSGE KLDGLEIVKK RKRGSGSGSG AHEDEIDEMG 240 NGDGSGFNYD SDEVELTSEV NGNNSGSVMV GDSKGKRKGL PAKNLMAERR RRKKLNDRLY 300 MLRSVVPKIS KMDRASILGD AIDYLKELLQ RINDLHNELE ATPQGSLMQA SSSIHPLTPT 360 PPTLPQHVKE ELCPSTLPSP KNHPSKVEVH AREGRGVNIH MVCGRRPGLL LSTLRALENL 420 GLDIQQAVIS CFNGFALDVF RAQQCREGQE MLPEQIKAVL LETAGYHGAI

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MLPENDTAWM DNHQDETSSW TPTTTTNHHQ PPCTNNQNTY TSLTTLKNML ETEWFQNNNN  60
NNLNLTSTDT NPMFLPLDSS SSCSPSQSHS HSHFTQFPFI PTKYNNNTNL NLTAFDLPFE  120
FGCDPSFISN NPPTNFLNFP TQQMATSSEY TETSYHDDLT GTGTGFTGFE PVNPVFPVRS  180
KVLRPLEVSP PVGAQPTLFQ KRAALRQSGE KLDGLEIVKK RKRGSGSGSG AHEDEIDEMG  240
NGDGSGFNYD SDEVELTSEV NGNNSGSVMV GDSKGKRKGL PAKNLMAERR RRKKLNDRLY  300
MLRSVVPKIS KMDRASILGD AIDYLKELLQ RINDLHNELE ATPQGSLMQA SSSIHPLTPT  360
PPTLPQHVKE ELCPSTLPSP KNHPSKVEVH AREGRGVNIH MVCGRRPGLL LSTLRALENL  420
GLDIQQAVIS CFNGFALDVF RAQQCREGQE MLPEQIKAVL LETAGYHGAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	294	KRKGLPAKNLMAERRRRKK
2	288	295	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-118	bHLH family protein