PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc007164.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 446aa MW: 51530.8 Da PI: 6.656

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc007164.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.6	1.5e-29	130	186	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkgs+ pr+Y++C++++Cp+kkkve++ ++ ++ei+Y+g+Hnh+ Cse_sc007164.1_g070.1 130 EDGYKWRKYGQKQVKGSKKPRGYFKCSYPNCPAKKKVEKDL-NGYITEIIYKGKHNHP 186 7**************************************.*************8 PP
2	WRKY	100.5	1e-31	274	331	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYGqK+vkg+++pr+YY+Ct gCpv+k ver+++d + v++tYeg+Hnh Cse_sc007164.1_g070.1 274 LDDGYKWRKYGQKVVKGNPNPRNYYKCTNVGCPVRKLVERASHDLQSVITTYEGKHNH 331 59******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MGSFYNSLSN FVSNENKNEE VNWGLFNFNN GLESQTQFLD SPSFAFNFNV MSSSGSHYGL 60 DFKEEKTNVF GNIMEESIKS EVLDWNVENR PQEIDFSMEA NKIEQELVQY PQTGNSLDLI 120 QATKEQNRFE DGYKWRKYGQ KQVKGSKKPR GYFKCSYPNC PAKKKVEKDL NGYITEIIYK 180 GKHNHPMPHN KKRSSLNSFQ DTIFNNSVEK THVELLSQTS LGDDEYDQDS SFSKSGNERE 240 NEPNAKRWKR DEAESKAIQE PKIVIETKSE IDILDDGYKW RKYGQKVVKG NPNPRNYYKC 300 TNVGCPVRKL VERASHDLQS VITTYEGKHN HGVPMPRGSS YLTNQPTTSY TTTTSNNYVS 360 MTSRELPNYS NDTTSNNGVP MNYLDNVHSV RSLSNNTGHN SHMSRTLEHT KNYDMFESMY 420 PNQDWEREFL SAAKKEPEND FIYNSF

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MGSFYNSLSN FVSNENKNEE VNWGLFNFNN GLESQTQFLD SPSFAFNFNV MSSSGSHYGL  60
DFKEEKTNVF GNIMEESIKS EVLDWNVENR PQEIDFSMEA NKIEQELVQY PQTGNSLDLI  120
QATKEQNRFE DGYKWRKYGQ KQVKGSKKPR GYFKCSYPNC PAKKKVEKDL NGYITEIIYK  180
GKHNHPMPHN KKRSSLNSFQ DTIFNNSVEK THVELLSQTS LGDDEYDQDS SFSKSGNERE  240
NEPNAKRWKR DEAESKAIQE PKIVIETKSE IDILDDGYKW RKYGQKVVKG NPNPRNYYKC  300
TNVGCPVRKL VERASHDLQS VITTYEGKHN HGVPMPRGSS YLTNQPTTSY TTTTSNNYVS  360
MTSRELPNYS NDTTSNNGVP MNYLDNVHSV RSLSNNTGHN SHMSRTLEHT KNYDMFESMY  420
PNQDWEREFL SAAKKEPEND FIYNSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	9e-88	WRKY family protein