PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007102.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 226aa MW: 26272.8 Da PI: 10.2806 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 52.6 | 1.5e-16 | 70 | 156 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfY++YA+e GF+vr+ k s +n +k+t + + ++++ ++ + +rr+ra++r+ C+akl++k+++++kw+ +k+ ++HnH Cse_sc007102.1_g020.1 70 KFYKDYAREGGFEVRRGGVKLSANNL--KKKTNNVETNESQSHVGSE-VIKRRKRASQRCRCQAKLRIKRTSKNKWVAYKFLEKHNHR 154 6*****************99996655..4555444444455555555.889************************************* PP FAR1 89 la 90 l+ Cse_sc007102.1_g020.1 155 LV 156 97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MNTTTSDLQG EPSTPISNNN LQHPVIHDDQ SVPQVGSYQP TPEGSKFWVQ DAKNKLVEGT 60 EFDTLEIALK FYKDYAREGG FEVRRGGVKL SANNLKKKTN NVETNESQSH VGSEVIKRRK 120 RASQRCRCQA KLRIKRTSKN KWVAYKFLEK HNHRLVREED YMYLKVARKL SFPQQQLLYH 180 LYNANLGPTR AWKVLKEIYG RFENTGVTDV ECRNYKRGLN NFIGKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-16 | FAR1 family protein |