PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007069.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | GRF | ||||||||
Protein Properties | Length: 326aa MW: 37218.5 Da PI: 9.0123 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 79.2 | 3.8e-25 | 81 | 125 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e Cse_sc007069.1_g040.1 81 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEV 125 79****************************************985 PP | |||||||
2 | QLQ | 59.7 | 8.1e-21 | 15 | 48 | 2 | 35 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FTa+Q+q+L++Q+l+yKy+++++P+PpeLl+ i Cse_sc007069.1_g040.1 15 PFTASQWQELEHQALVYKYMISGMPIPPELLFTI 48 9******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MMSTGKESVR NGRYPFTASQ WQELEHQALV YKYMISGMPI PPELLFTIKT SLDSSTKLLL 60 HHQPPTIGWN CFQMGFGRKI DPEPGRCRRT DGKKWRCSKE AYPDSKYCER HMHRGRNRSR 120 KPVEVSNNMS STTPKTPPTA IPLITTKSTN YPSPNSHPLS SSDYYNNATA HLSSYSSRPN 180 SLAGLGNVLS SQDQFLLDSS PYNRKRYGMK EEELPFFSES SGTIKTSSMG LNDSPWQLEP 240 LAINNSYSKQ RAFSDFHQNG YNSYQQQDQT YCAQFGLKLD KKDEPQKVMH HFFDEWPPNE 300 KDSSTTQLSI SIPSSAHDFF LSHNDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 3e-54 | GRF family protein |