PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007069.1_g040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRF
Protein Properties Length: 326aa    MW: 37218.5 Da    PI: 9.0123
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007069.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC79.23.8e-2581125145
                    WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                            d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e 
  Cse_sc007069.1_g040.1  81 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEV 125
                            79****************************************985 PP

2QLQ59.78.1e-211548235
                    QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35
                           +FTa+Q+q+L++Q+l+yKy+++++P+PpeLl+ i
  Cse_sc007069.1_g040.1 15 PFTASQWQELEHQALVYKYMISGMPIPPELLFTI 48
                           9******************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MMSTGKESVR NGRYPFTASQ WQELEHQALV YKYMISGMPI PPELLFTIKT SLDSSTKLLL  60
HHQPPTIGWN CFQMGFGRKI DPEPGRCRRT DGKKWRCSKE AYPDSKYCER HMHRGRNRSR  120
KPVEVSNNMS STTPKTPPTA IPLITTKSTN YPSPNSHPLS SSDYYNNATA HLSSYSSRPN  180
SLAGLGNVLS SQDQFLLDSS PYNRKRYGMK EEELPFFSES SGTIKTSSMG LNDSPWQLEP  240
LAINNSYSKQ RAFSDFHQNG YNSYQQQDQT YCAQFGLKLD KKDEPQKVMH HFFDEWPPNE  300
KDSSTTQLSI SIPSSAHDFF LSHNDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.13e-54GRF family protein