PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006971.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 298aa    MW: 33425.6 Da    PI: 5.6028
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006971.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.81.5e-164089255
                           HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                           r +h+e E+rRR++iN++f+ Lr+l+P++    ++K + a+ L ++++YI+ Lq
  Cse_sc006971.1_g070.1 40 RSKHSETEQRRRSKINERFQHLRDLIPQN----DQKTDRASFLLEVIQYIHFLQ 89
                           899*************************9....9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MVRTVKNYQQ QQEDYEVDDV VDGDYTSTSH KDGSKATSHR SKHSETEQRR RSKINERFQH  60
LRDLIPQNDQ KTDRASFLLE VIQYIHFLQE KLQVYEGTCQ GWSPEMTKLL RGNYGADNYP  120
DQLQPARNGS VYESDVIPTP IPLTNTQNLV EPDVSGTTAF RTTDRKTYEA EPSHTPQGSF  180
PDVELLASQS RPPTWNEGQS FTPSELEESS ISNAYSKGLL DNITQALGSS GVDLSQASIS  240
VQFDIKKGTS SGATSTPLRF KDHNLLSSGN QAMGHCAVRS RDDVIDQVHK KARTEQNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-40bHLH family protein