PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006965.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 373aa MW: 42696.1 Da PI: 5.1691

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006965.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.7e-07	250	298	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 rW+ E ++l+++v + G g+Wk + + +R+ ++k++w+++l Cse_sc006965.1_g030.1 250 RWSVPEVLQLIQGVSKCGVGRWKEMKKLFFedsPHRSSVDLKDKWRNLL 298 9*********************8888889999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MCNGIEADRR RAELACSRKW SPLRLLVMLG KMDIHEVDAY EFIYAALENE VLKLEHFYPD 60 RNFTDCLYVT NDEAFASGFL DADIAKNGVL KLLFSQLLVD TLGEPIEGLA DVGENFPDIC 120 EDDLLDIIKD DSSVPCMEKN DTTRDEKDLV LKTPELDPLA RIFRFKTKPR AKNFKRSTLK 180 TYDNFKSFSE VGDILLSFSD MRDESSIVEK SSRCKLREYS DEALDRMWNR DDDNGGTKAQ 240 KDKIGTKQRR WSVPEVLQLI QGVSKCGVGR WKEMKKLFFE DSPHRSSVDL KDKWRNLLAA 300 SCKSASGNGR GEHASIPHDI LCRVRELSEI HPYPRNQQQK RKELKTESSS SSNSEDNIWS 360 PTSEDNIWAV SDC

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MCNGIEADRR RAELACSRKW SPLRLLVMLG KMDIHEVDAY EFIYAALENE VLKLEHFYPD  60
RNFTDCLYVT NDEAFASGFL DADIAKNGVL KLLFSQLLVD TLGEPIEGLA DVGENFPDIC  120
EDDLLDIIKD DSSVPCMEKN DTTRDEKDLV LKTPELDPLA RIFRFKTKPR AKNFKRSTLK  180
TYDNFKSFSE VGDILLSFSD MRDESSIVEK SSRCKLREYS DEALDRMWNR DDDNGGTKAQ  240
KDKIGTKQRR WSVPEVLQLI QGVSKCGVGR WKEMKKLFFE DSPHRSSVDL KDKWRNLLAA  300
SCKSASGNGR GEHASIPHDI LCRVRELSEI HPYPRNQQQK RKELKTESSS SSNSEDNIWS  360
PTSEDNIWAV SDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	5e-20	MYB_related family protein