PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006869.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 319aa    MW: 36522.3 Da    PI: 8.1973
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006869.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.26.4e-09751303290
                   FAR1  32 tfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                            +   s   +      +    ++k+  +r++ r++C a+l++kk   + +evtk+e  HnH+l+
  Cse_sc006869.1_g010.1  75 QSEISDDSH------RfsdvKKKQTGKRTSFRCSCSASLTIKKI-GNIFEVTKFEDGHNHTLV 130
                            333333333......1343334677799999*************.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MCYVESVRIR DHVGFYVCGK DGTRTWYPDC LEKPIEGCQF ISVDQAYNFY VAYGLNQDSN  60
SKSDDSNADN HINEQSEISD DSHRFSDVKK KQTGKRTSFR CSCSASLTIK KIGNIFEVTK  120
FEDGHNHTLV SKKDMIFLKN SRKMGYTKQH FLYQVSNANF GPAVRFRLMK QVYGGFDRVG  180
TTVIDCKNQK KRISVFIGDR DAKMAVEKLL SRKLHSPGFY VNYYKGDDDK LVGLFWADAE  240
AIRDYASFGD IVSFDATFRS NKYKMVFVPF TGINHHNRCL TFASGLLADE SVDVYIWLLD  300
QFKEAFGKHP DVVITDQDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-38FAR1 family protein