PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006803.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 197aa    MW: 21327.9 Da    PI: 8.3598
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006803.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260143.85.2e-4510108199
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +CaaCk+lrrkC ++C++apyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear+rdPvyG+vg i+ lq+q++
  Cse_sc006803.1_g020.1  10 PCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNDLLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVD 97 
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallke 99 
                            +l++el+++++
  Cse_sc006803.1_g020.1  98 RLQKELDAANA 108
                            ******99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MASSSSYNSP CAACKFLRRK CMPGCIFAPY FPPEEPQKFA NVHKIFGASN VTKLLNDLLP  60
HQREDAVNSL AYEAEARVRD PVYGCVGAIS FLQRQVDRLQ KELDAANADL IRYACNEIPS  120
GLPAVPHMSS MQPITPRQRT IDHYSTRRSG TIEGGGGYHT QSPPSFPYPY ANQFQWNASS  180
SSGNLGGGGG GGGQGNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63090.21e-75LBD family protein