PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006546.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family BES1
Protein Properties Length: 326aa    MW: 35557.8 Da    PI: 8.5735
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006546.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822200.35.9e-62141441130
                 DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssas 87 
                            gg++rkp+w+E+Enn+rRERrRRaiaa iy GLRaqGny lpk++DnneVlkALc+eAGwvv +DGtt+rkgs+p+  + +++g+s++
  Cse_sc006546.1_g020.1  14 GGGRRKPSWREKENNRRRERRRRAIAANIYNGLRAQGNYDLPKHCDNNEVLKALCKEAGWVVLPDGTTFRKGSRPPlPTIDIGGASTT 101
                            689*************************************************************************9*********** PP

                 DUF822  88 aspesslqsslkssalaspvesysaspksssfpspssldsisl 130
                            ++p+ss++ s+  s + sp++sy++sp+sssfpsps++d++++
  Cse_sc006546.1_g020.1 102 TTPSSSQKPSPIMSPIMSPIPSYQCSPSSSSFPSPSKFDMNEN 144
                            ****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEMMGGADGG GGGGGGRRKP SWREKENNRR RERRRRAIAA NIYNGLRAQG NYDLPKHCDN  60
NEVLKALCKE AGWVVLPDGT TFRKGSRPPL PTIDIGGAST TTTPSSSQKP SPIMSPIMSP  120
IPSYQCSPSS SSFPSPSKFD MNENPFAYLR NAIPSSLPPL RISNSAPVTP PLSSPTSKCP  180
KPNNNFNWES FTKQSISTFN LPFFASSAPT SPTKYQRFTP ATIPECDESD SSTIDSCQWV  240
RFKNYEPMLT NPNSPTFNLV KPMAQVTVTK DSGGSDKGKG MEFEFENGGV KAWEGERIHD  300
VGWEGERIHD VGLDDLELTL GSGTAK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11736RRKPSWREKENNRRRERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.53e-83BES1 family protein