PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006535.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 485aa    MW: 55482.3 Da    PI: 9.788
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006535.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.25.9e-1321991198
                           HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                     B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                           + + +l++p ++  ++  + +++ +  +  + +r+W vk+  +k     v+++GW+ Fv++ng+++ DfvvFk++g++ f    +vf+
  Cse_sc006535.1_g010.1 21 GLNTQLSIPISYQ-KYLVSRRKN-KTAILKRGSRKWHVKI--DKD---WVFGEGWETFVRENGVQDFDFVVFKHEGNMVF--DTMVFD 99
                           4456799**9997.773333444.455566799*******..555...59************************999988..555555 PP
2B338.32.5e-12386472292
                            EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                     B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                            fk   ++++ k++ +++p +fa+++g ++ ++ +++++de+ r W  k+  + + +r+ ++ G k+   angLk+gD +v++l+++ +
  Cse_sc006535.1_g010.1 386 FKSIATAYSIKKSTVYVPLDFARSNGFVNMNNSEMVVMDEKKRLWPTKV--CPTHDRVRIK-GFKDILAANGLKAGDEFVLELVDNGK 470
                            6888899******************88888888****************..9999999988.********************998644 PP

                            E.. CS
                     B3  90 fel 92 
                            + +
  Cse_sc006535.1_g010.1 471 K-P 472
                            3.3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    
MRGPPSKCIS PSCFFKFIKT GLNTQLSIPI SYQKYLVSRR KNKTAILKRG SRKWHVKIDK  60
DWVFGEGWET FVRENGVQDF DFVVFKHEGN MVFDTMVFDT SSCEREYPIH KAMTMKTKKA  120
CLEEKSFGKC KTDTDVLKKT PKVKDTYINK STKPFKSEKT MISHHSNHPY FIGTLKAPTR  180
QDMLSSLDTC LSINCQLSQY LPFSFTKSNG LRAGEMILRN GQTQLSWIVD LKIYSGNYYC  240
IGRGWPAFYI ENGLKQGDRF KLEFEQTEID SMANFYHIEK KPAESHEAVE TEGLNCHRHF  300
VGTLKHYDMS RKYLLIPKAF ALANGLSSGD MILKYAGKEG TQYCITNGLE NGDIIKFELI  360
QNGEKPVAVI SRLPEESRKK KENCCFKSIA TAYSIKKSTV YVPLDFARSN GFVNMNNSEM  420
VVMDEKKRLW PTKVCPTHDR VRIKGFKDIL AANGLKAGDE FVLELVDNGK KPLMNLKCMK  480
KAPLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-29B3 family protein