PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc006477.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 27144.5 Da PI: 4.5079 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.1 | 1.5e-13 | 50 | 92 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR+++N++++ Lr ++P+ + K++Ka+i + A++YI+ L Cse_sc006477.1_g020.1 50 VSERNRRKKLNDRLFALRAVVPNiS------KMDKASIIKDAIDYIQTL 92 57*********************66......****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MENITDVNWE SILQTEDYSW GVLEETFSGC SDSSSPDGGQ SSSPASKNIV SERNRRKKLN 60 DRLFALRAVV PNISKMDKAS IIKDAIDYIQ TLHEQERTIL AELTELESQK SEPENFDFNQ 120 ETKFMSMEKS KKIRVEQAFD SSGSSSYPIE VQDLNVSYMG EKTVLVNLKC NKRRDTIVKL 180 CEVFESLKLK IVTATISSFS ERLFNTLFIQ TDEEDTDVLK IQLETAISTL NDPHSPMSM |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 168 | 174 | LKCNKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57150.1 | 1e-65 | bHLH family protein |