PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006470.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 797aa MW: 92365.2 Da PI: 7.3627

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006470.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.3e-21	101	209	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvk 69 +fY++Y+k+vGF+vrk ++k ++ + ++f Cs+eg++e ++ +ek++r+r + r++C ak++++ Cse_sc006470.1_g030.1 101 NFYKDYGKRVGFDVRKGVHYKPNKGEDPNLKWFLCSREGTNEGKEVVddsknvvsehsditmdenvKEKKKRNRGSFRCDCLAKIRIR 188 6*************************************998876688999*********99999************** PP FAR1 70 kekdgkwevtkleleHnHela 90 k + + +ev+++++ HnH+l+ Cse_sc006470.1_g030.1 189 KIEGNLYEVYTFVEGHNHPLV 209 *****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MEMSIEFSSS TSNNQCSSSS NNQCSTSTVN QCSSLSNNQC SSSTDNSLST NDDNVQVVCV 60 KDHGGFYTCD DKGKRTWFPD IDIGDKPVDG CKFVSIDQAY NFYKDYGKRV GFDVRKGVHY 120 KPNKGEDPNL KWFLCSREGT NEGKEVVDDS KNVVSEHSDI TMDENVKEKK KRNRGSFRCD 180 CLAKIRIRKI EGNLYEVYTF VEGHNHPLVA EKDMIFMKSS RDLTYTKQHF LVQVSNANFG 240 PSTGFKLLKQ KCGGFDRVGA TVVDYKNQKK KINLFIGDRD AQMAVEKLLS KKLHTPGFYV 300 NYKTGDEAYV CVLMHQNFTF FIISFLTFLF LGDDDKLVGL FSADEQVIKD YAIFGDIISF 360 DATFRSNKYK MVLVPFTGIN HHNRCITFAS SLLSDETVSA SKWLLNEFKN VFVKDPNVVI 420 TDQDPSMKIV IPECFPNTRH RLCMWHIMQK LTTKVGTTIC SKTDFKRRIC EIVWTDQILL 480 VDFEREWEYM INDFELDDNK WLKDIFGMRE RWIPACLHDE PMAGLMRTTS RSESENHFFG 540 KWTSPHLTLV EFLSHYDTAI EYQRYIERKN DHDSRYRKPV LKTDLELEKE ASTFYTQTVF 600 FAVQDEIYAS YSHCMSVNIL QIDDAERYSI RDMQAENKIR HDSNFVVYQV DFCKSAMEIK 660 CSCKHYEAYG LLCRHAYYVL RMNNIKEFPR KYLNKRWLKN AKPFNSVVTK VVAESESSLQ 720 SEVFDLYEIF ESTVDRLVYK MDKLNIFKDQ MKELLAKAKI DVPVVPKLIS KDVLSSMLGV 780 KEPKLHNIRN PEESSNK

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MEMSIEFSSS TSNNQCSSSS NNQCSTSTVN QCSSLSNNQC SSSTDNSLST NDDNVQVVCV  60
KDHGGFYTCD DKGKRTWFPD IDIGDKPVDG CKFVSIDQAY NFYKDYGKRV GFDVRKGVHY  120
KPNKGEDPNL KWFLCSREGT NEGKEVVDDS KNVVSEHSDI TMDENVKEKK KRNRGSFRCD  180
CLAKIRIRKI EGNLYEVYTF VEGHNHPLVA EKDMIFMKSS RDLTYTKQHF LVQVSNANFG  240
PSTGFKLLKQ KCGGFDRVGA TVVDYKNQKK KINLFIGDRD AQMAVEKLLS KKLHTPGFYV  300
NYKTGDEAYV CVLMHQNFTF FIISFLTFLF LGDDDKLVGL FSADEQVIKD YAIFGDIISF  360
DATFRSNKYK MVLVPFTGIN HHNRCITFAS SLLSDETVSA SKWLLNEFKN VFVKDPNVVI  420
TDQDPSMKIV IPECFPNTRH RLCMWHIMQK LTTKVGTTIC SKTDFKRRIC EIVWTDQILL  480
VDFEREWEYM INDFELDDNK WLKDIFGMRE RWIPACLHDE PMAGLMRTTS RSESENHFFG  540
KWTSPHLTLV EFLSHYDTAI EYQRYIERKN DHDSRYRKPV LKTDLELEKE ASTFYTQTVF  600
FAVQDEIYAS YSHCMSVNIL QIDDAERYSI RDMQAENKIR HDSNFVVYQV DFCKSAMEIK  660
CSCKHYEAYG LLCRHAYYVL RMNNIKEFPR KYLNKRWLKN AKPFNSVVTK VVAESESSLQ  720
SEVFDLYEIF ESTVDRLVYK MDKLNIFKDQ MKELLAKAKI DVPVVPKLIS KDVLSSMLGV  780
KEPKLHNIRN PEESSNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-81	FAR1 family protein