PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006456.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 355aa MW: 40723.8 Da PI: 4.642

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006456.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.3	1.6e-35	14	106	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl k ye+++d+++++lisws++++sf+v+de++fa+++Lp+yFkhsn+aSF RQLn+YgF+k+++++ weF+++ F kg Cse_sc006456.1_g050.1 14 FLLKCYEMVDDPSTDDLISWSQTNDSFIVWDESNFASHLLPNYFKHSNYASFQRQLNIYGFRKTDTDR---------WEFANDGFIKG 92 9*************************************************************9999.........******* PP XXXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkkse 103 +k+ll++i+rkk + Cse_sc006456.1_g050.1 93 QKHLLKTINRKKGT 106 *********965 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MVKKSSENAA IAPFLLKCYE MVDDPSTDDL ISWSQTNDSF IVWDESNFAS HLLPNYFKHS 60 NYASFQRQLN IYGFRKTDTD RWEFANDGFI KGQKHLLKTI NRKKGTNVTV QQKVIQQKDP 120 EPEIIHVSRD DESRHAHLWK EVESLKTDKN MLMQELVKQR QHQETSRTKM LVLREQLKGM 180 EKNQHQLLSF IVMAMQSPGF IAQLSPQVPS KTIIKPVTDD IDTIVAPHDR AIVKYQPPVE 240 SPAYISEDSL EMGLTLEEIE DILMNDTPGS TVDEGMDSTE NYDSVTIHDL PNCDSMIDEF 300 LSSPLEKNKI TVDHTDDEVW SSEMETDEYR FLTEGFEKSL IVSPRSGTSP LTAFN

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MVKKSSENAA IAPFLLKCYE MVDDPSTDDL ISWSQTNDSF IVWDESNFAS HLLPNYFKHS  60
NYASFQRQLN IYGFRKTDTD RWEFANDGFI KGQKHLLKTI NRKKGTNVTV QQKVIQQKDP  120
EPEIIHVSRD DESRHAHLWK EVESLKTDKN MLMQELVKQR QHQETSRTKM LVLREQLKGM  180
EKNQHQLLSF IVMAMQSPGF IAQLSPQVPS KTIIKPVTDD IDTIVAPHDR AIVKYQPPVE  240
SPAYISEDSL EMGLTLEEIE DILMNDTPGS TVDEGMDSTE NYDSVTIHDL PNCDSMIDEF  300
LSSPLEKNKI TVDHTDDEVW SSEMETDEYR FLTEGFEKSL IVSPRSGTSP LTAFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	7e-67	HSF family protein