PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006356.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 543aa MW: 61783.7 Da PI: 8.8569

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006356.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	445	467	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ sF++ L++H+++ H Cse_sc006356.1_g010.1 445 QCNYCTDSFKSIGVLESHLQRaH 467 8******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MLKTFSLHIT SPSKAQFSSC KDVALHLKSL VETNGANPLD EGAMMLVDGD TDSPVECDLI 60 HTNPLQSLVV EDEEKYANPC RDMVLMVDNH QKVRNKKRNR KPKALKNDKS DFKGLGVIYV 120 NGNKIDLLHL ARDANREFEA KLSSRTEGLV RDAEFMEFLK DLEGKWSSDR KRRKFVDATI 180 LGDGLPKNWE ILLSLRPRVY PRSLYCRKFV SPSGEQFKSC KEVAIYLKSL YDANPPEDGD 240 IKLTENDSHV DNQHEFQLRK RKRKSKAVEN SDEEYNWGLA VTKVNGEMMD LNYLARVGDC 300 VFEDKLKKIT EGMESEDELL GFLESVNGRW ASIWKRRIYV YAATIEKLLP VHWQILISLG 360 PHAHQPSLHC RKFVSPKGRQ FDSCKDVAFF LKTQSEEEAM MLRERGCQVG PESVARVPRS 420 SARASELNSL GTNDASYVPI QCLIQCNYCT DSFKSIGVLE SHLQRAHKPI IQSLYTETLS 480 QKHSVPCGAV IAQEKNSSKQ KSTAVYKMQK LPTLRLYVQN AKKLMRPQDL KNVSSEVIQH 540 ANK

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MLKTFSLHIT SPSKAQFSSC KDVALHLKSL VETNGANPLD EGAMMLVDGD TDSPVECDLI  60
HTNPLQSLVV EDEEKYANPC RDMVLMVDNH QKVRNKKRNR KPKALKNDKS DFKGLGVIYV  120
NGNKIDLLHL ARDANREFEA KLSSRTEGLV RDAEFMEFLK DLEGKWSSDR KRRKFVDATI  180
LGDGLPKNWE ILLSLRPRVY PRSLYCRKFV SPSGEQFKSC KEVAIYLKSL YDANPPEDGD  240
IKLTENDSHV DNQHEFQLRK RKRKSKAVEN SDEEYNWGLA VTKVNGEMMD LNYLARVGDC  300
VFEDKLKKIT EGMESEDELL GFLESVNGRW ASIWKRRIYV YAATIEKLLP VHWQILISLG  360
PHAHQPSLHC RKFVSPKGRQ FDSCKDVAFF LKTQSEEEAM MLRERGCQVG PESVARVPRS  420
SARASELNSL GTNDASYVPI QCLIQCNYCT DSFKSIGVLE SHLQRAHKPI IQSLYTETLS  480
QKHSVPCGAV IAQEKNSSKQ KSTAVYKMQK LPTLRLYVQN AKKLMRPQDL KNVSSEVIQH  540
ANK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	259	264	RKRKRK