PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc006319.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family BES1
Protein Properties Length: 305aa    MW: 33358.6 Da    PI: 9.3223
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc006319.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822207.24.6e-6421402149
                 DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 
                            +s+r+ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkAL+ eAGw+ve+DGttyrkg+kple+++ +g sasas
  Cse_sc006319.1_g030.1   2 TSTRMPTWKERENNKRRERRRRAIAAKIFMGLRMYGNYKLPKHCDNNEVLKALADEAGWTVEPDGTTYRKGCKPLERMD-VGGSASAS 88 
                            689************************************************************************7776.677999** PP

                 DUF822  90 pesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                            p+ss+q        +sp +sy++sp ss++ spss++ ++++++ sl+p+l++ls++sss
  Cse_sc006319.1_g030.1  89 PCSSYQ--------PSPYASYHPSPPSSAIASPSSSSYTPNTHPDSLIPWLKNLSSSSSS 140
                            ******........****************************************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MTSTRMPTWK ERENNKRRER RRRAIAAKIF MGLRMYGNYK LPKHCDNNEV LKALADEAGW  60
TVEPDGTTYR KGCKPLERMD VGGSASASPC SSYQPSPYAS YHPSPPSSAI ASPSSSSYTP  120
NTHPDSLIPW LKNLSSSSSS SYSAKLPHLY FHTGSISAPV TPPMSSPKVR SPPCEPHSEW  180
FTGIRPTSPT FSLVASNPFG FKEAVVSNGG SRMWTPGQSG TCSPAIPSGF DNSADIPMAE  240
VVSDEFAFGS NAGGRVKPWE GERIHEVFGS DDLELTLGSS KTRYVKINKE AMHHIGRLQC  300
LRVII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-86BES1 family protein