PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc006283.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 161aa MW: 17696.6 Da PI: 8.9889 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.2 | 1.3e-20 | 17 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g+WvAe+r p++ r r++lg+++taeeAa+a++aa +l+g Cse_sc006283.1_g020.1 17 RYKGVRMRK-WGKWVAEVRQPNS---RDRIWLGSYDTAEEAARAYDAALFCLRG 66 69*****99.*******888732...5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MVRPTSSGGK NEKKEGRYKG VRMRKWGKWV AEVRQPNSRD RIWLGSYDTA EEAARAYDAA 60 LFCLRGPSAL INFPTNPPNI PVSADLSPTQ IQVAASRHAR GLSTDSSSLV HVGNPKPTEA 120 QEFSLFNEYG NTSYFPPEEG SGGNSGDNGS VVFETQRLWA Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 2e-30 | ERF family protein |