PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006268.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 673aa MW: 76069.5 Da PI: 5.0181

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006268.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.8	3.6e-17	89	178	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k ++ps+v+ +l lpk+f++++ ++ ++t++l d++ ++++ k+ ++ l++GWk F a++L +gD++vF+l+++ Cse_sc006268.1_g050.1 89 FVKLMLPSHVSGGFWLGLPKSFCDAYL--PKDDVTVVLVDKDDQKFNTKY--LDRKT--GLSGGWKAFSIAHKLLAGDVLVFQLIEH- 169 89********************994..23679************..44433..39********************9974. PP EE..EEEEE- CS B3 89 efelvvkvfr 98 +++v ++r Cse_sc006268.1_g050.1 170 -WKMKVYIVR 178 .345666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MAIGPQSKPN DTSPLSAMDV KNKALEIKKK FAQKKTTNPK QRVKGVNFDL SRNLIVSYDP 60 NTAALAQPSS AIERANEVQA SLPSELPSFV KLMLPSHVSG GFWLGLPKSF CDAYLPKDDV 120 TVVLVDKDDQ KFNTKYLDRK TGLSGGWKAF SIAHKLLAGD VLVFQLIEHW KMKVYIVRAI 180 GLNEIDGALG LMNLVPCDMN GYQHQNNKDA SNLKRAENMD IDLHEDNDQD NDLIIYDQPV 240 DDTEYADSPV SEGLRFSQSV IEFKDIKGVD DFSIVVDNLV IDSEIPKHFQ IKYYDLCCSQ 300 NMYLHENLLK GLNVQLAVGI ILETVTISDA IRACKVTITR DDIATWDKTL KAFEEVGMKV 360 GFLRARISKL MGLLFESNEL LEAKRIEQVK AEEEMRVIKE KLCGVREMIK NLDVEMETLK 420 LKGQKLEPVX FFFFVCTNIK TIRDASSLKR AENMDLDLHE DNDQDNGLIM YDQSVANAEY 480 ADSPVSEGLR FSQAVIEFKD IKGVDDFSIV VDNLVIDSEI PKHFKIKYYD LCCSQNMYLH 540 QNLLKGLNVQ LAVGIILETV TIADAIRACK VTITREDIAT WDTTLKAFEE VGMKVGFLRA 600 RISKLMGLLF ESNELLEAKR IEQVKAEEEI IVIKEKLCGV REMIKNLDVE METLKLKGQK 660 LEPVFHKEAN APW

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MAIGPQSKPN DTSPLSAMDV KNKALEIKKK FAQKKTTNPK QRVKGVNFDL SRNLIVSYDP  60
NTAALAQPSS AIERANEVQA SLPSELPSFV KLMLPSHVSG GFWLGLPKSF CDAYLPKDDV  120
TVVLVDKDDQ KFNTKYLDRK TGLSGGWKAF SIAHKLLAGD VLVFQLIEHW KMKVYIVRAI  180
GLNEIDGALG LMNLVPCDMN GYQHQNNKDA SNLKRAENMD IDLHEDNDQD NDLIIYDQPV  240
DDTEYADSPV SEGLRFSQSV IEFKDIKGVD DFSIVVDNLV IDSEIPKHFQ IKYYDLCCSQ  300
NMYLHENLLK GLNVQLAVGI ILETVTISDA IRACKVTITR DDIATWDKTL KAFEEVGMKV  360
GFLRARISKL MGLLFESNEL LEAKRIEQVK AEEEMRVIKE KLCGVREMIK NLDVEMETLK  420
LKGQKLEPVX FFFFVCTNIK TIRDASSLKR AENMDLDLHE DNDQDNGLIM YDQSVANAEY  480
ADSPVSEGLR FSQAVIEFKD IKGVDDFSIV VDNLVIDSEI PKHFKIKYYD LCCSQNMYLH  540
QNLLKGLNVQ LAVGIILETV TIADAIRACK VTITREDIAT WDTTLKAFEE VGMKVGFLRA  600
RISKLMGLLF ESNELLEAKR IEQVKAEEEI IVIKEKLCGV REMIKNLDVE METLKLKGQK  660
LEPVFHKEAN APW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	7e-31	B3 family protein