PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006268.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 508aa MW: 57113.1 Da PI: 9.1789

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006268.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.5	6.8e-15	156	244	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+++ps+v +l l k+f++++ +k + t++l de+ ++++ k+ ++ + l++GW++F a++L egD++vF+l+++ Cse_sc006268.1_g030.1 156 FVKAMLPSHVAGGFWLGLTKQFCDANL-PK-HDETIVLVDEDCQEFNTKF--LVGK--IGLSGGWRGFSIAHKLLEGDVLVFQLIEHW 237 89*******************9994.33.4459***********..5555..44**********************9875 PP EE..EEEEE CS B3 89 efelvvkvf 97 +f +v ++ Cse_sc006268.1_g030.1 238 KF--KVYIV 244 66..56555 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MAIPRETSPP LSALDVKRMA LEIKKKYAQK KTNNTTPPLS SKWKQKKAVE IKRKSLQKNS 60 TSLVKQTVEE SKQKKAIEIK DKSLQKKATN PTKQTVEALP DNLPLKACRD ILRGSIVSYD 120 PKTAAAAQPP DSQAKSAAIE RANEVQASLP SELPSFVKAM LPSHVAGGFW LGLTKQFCDA 180 NLPKHDETIV LVDEDCQEFN TKFLVGKIGL SGGWRGFSIA HKLLEGDVLV FQLIEHWKFK 240 VYIVRVHGLN EIDGALGLLN LIPSGMTVTN VYQRKKKKNS VNSQKAVDMD IDLHQENVQE 300 NDLVVYDQSV DDSECADAPV SEGLRFSQSV IEFKDIKGID DFNIVVDTLV IDSEIPKHFL 360 IKYYDLCRSQ MTYLHENLLK GLNVKLAVGI ILETVTIADA IRACKVTITR DDIETWDKTL 420 KAFEEIGMKV GFLRARISKL KGLLFESNEL LEAKRNKQVK AEEEMIIIKE KLNDVRRVIK 480 NLDAEVETLK LKGQKLDTIF HKEANAPW

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MAIPRETSPP LSALDVKRMA LEIKKKYAQK KTNNTTPPLS SKWKQKKAVE IKRKSLQKNS  60
TSLVKQTVEE SKQKKAIEIK DKSLQKKATN PTKQTVEALP DNLPLKACRD ILRGSIVSYD  120
PKTAAAAQPP DSQAKSAAIE RANEVQASLP SELPSFVKAM LPSHVAGGFW LGLTKQFCDA  180
NLPKHDETIV LVDEDCQEFN TKFLVGKIGL SGGWRGFSIA HKLLEGDVLV FQLIEHWKFK  240
VYIVRVHGLN EIDGALGLLN LIPSGMTVTN VYQRKKKKNS VNSQKAVDMD IDLHQENVQE  300
NDLVVYDQSV DDSECADAPV SEGLRFSQSV IEFKDIKGID DFNIVVDTLV IDSEIPKHFL  360
IKYYDLCRSQ MTYLHENLLK GLNVKLAVGI ILETVTIADA IRACKVTITR DDIETWDKTL  420
KAFEEIGMKV GFLRARISKL KGLLFESNEL LEAKRNKQVK AEEEMIIIKE KLNDVRRVIK  480
NLDAEVETLK LKGQKLDTIF HKEANAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	3e-40	B3 family protein