PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc006265.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 315aa MW: 34389.1 Da PI: 10.4286

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc006265.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.2	5.2e-31	243	300	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYe+eHnh+ Cse_sc006265.1_g040.1 243 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYESEHNHS 300 99**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MEELAVREAG AAGLQSLEHL IGLLSTHHHR KPSYPTTTTT NVDYTAVADV AVNKFKKFIS 60 LLDRSSTGHA RFRRGPISKH QIPIQKKSTL TPVPSILATA PSSTPSMVQE KVFAPVSIQQ 120 RVVKSGSFER KDVPTATINF AGAAVVASPA TSFMSSLTGD TDGLQPSMSS GFQITNMSQV 180 SSAGQPNASN SSFKRKCNSI DDSHTKCTNS SGRCHCTKKR KSRMKRIVRV PAISLKMADI 240 PPDDYSWRKY GQKPIKGSPH PRGYYKCSSL RGCPARKHVE RALDDPTMLI VTYESEHNHS 300 LNLKDSSATI IFESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	2e-82	WRKY family protein